An improved recursive algorithm for BLAST

Authors:
Hufei Zhu;Zhongding Lei;Francois Chin
Affiliations:
Institute for Infocomm. Research, 21 Heng Mui Keng Terrace, Singapore 119613, Singapore;Institute for Infocomm. Research, 21 Heng Mui Keng Terrace, Singapore 119613, Singapore;Institute for Infocomm. Research, 21 Heng Mui Keng Terrace, Singapore 119613, Singapore
Venue:
Signal Processing
Year:
2007

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Abstract

An improved recursive algorithm for BLAST is proposed. The speedups of the improved recursive algorithm over the original recursive algorithm in the number of multiplications and additions are 1.47 and 1.2 respectively.