Achieving organism clustering analysis by using PC cluster architecture with MPI techniques

Authors:
Williams Tsai;Neng-Mu Shih;Kun-Lin Hsieh
Affiliations:
Department of Information Management, National Taitung University, Taitung, Taiwan, R.O.C.;Department of Art and Crafts Education, National Taitung University, Taitung, Taiwan, R.O.C.;Department of Information Management & Research Group in Systemic and Theoretical Sciences, National Taitung University, Taitung, Taiwan, R.O.C.
Venue:
ICCOMP'07 Proceedings of the 11th WSEAS International Conference on Computers
Year:
2007

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Abstract

During the competitive environment, how to sufficiently and efficiently utilize the computational resources under the consideration of cost had became an important action to be done by most practitioners. For the recent years, the PC cluster architecture had been applied into many applications, especial for the computational resources. In this study, we will introduce a case study in Taiwan owing the issue based on PC cluster architecture with MPI techniques. This case is an application of clustering technique to DNA analysis. Not only the hardware/software architecture of PC cluster had been constructed, but the clustering algorithm based on such cluster architecture was also proposed in this study. And, the rationality of the proposed architecture and algorithm can be demonstrated well in this study.