Computational Challenges on Grid Computing for Workflows Applied to Phylogeny

Authors:
Raúl Isea;Esther Montes;Antonio J. Rubio-Montero;Rafael Mayo
Affiliations:
Fundación IDEA, Hoyo de la Puerta, Baruta, Venezuela 1080;CIEMAT, Madrid, Spain 28040;CIEMAT, Madrid, Spain 28040;CIEMAT, Madrid, Spain 28040
Venue:
IWANN '09 Proceedings of the 10th International Work-Conference on Artificial Neural Networks: Part II: Distributed Computing, Artificial Intelligence, Bioinformatics, Soft Computing, and Ambient Assisted Living
Year:
2009

Citing 4
Cited 0

DPRml: distributed phylogeny reconstruction by maximum likelihood

Bioinformatics
Taverna: lessons in creating a workflow environment for the life sciences: Research Articles

Concurrency and Computation: Practice & Experience - Workflow in Grid Systems
pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies

Bioinformatics
Evaluation of a utility computing model based on the federation of grid infrastructures

Euro-Par'07 Proceedings of the 13th international Euro-Par conference on Parallel Processing

Quantified Score

Hi-index	0.01

Visualization

Abstract

PhyloGrid is a new tool continuously in progress whose aim is two-fold: to reduce the technological divide that a partial scientific community with low computational skills has for accessing new powerful computational platforms such as Grid; and, to develop a user-friendly interface by means of a workflow integrated in a web-portal. MrBayes software has been selected for calculating the evolutionary history of the species which is being integrated into new tools that performs the execution of jobs. Finally, this new application has been tested on the Human Papillomavirus.