SIAM Journal on Computing
Fixed-Parameter Tractability and Completeness I: Basic Results
SIAM Journal on Computing
Tree adjoining grammars for RNA structure prediction
Theoretical Computer Science - Special issue: Genome informatics
Internal loops in RNA secondary structure prediction
RECOMB '99 Proceedings of the third annual international conference on Computational molecular biology
Universal DNA tag systems: a combinatorial design scheme
RECOMB '00 Proceedings of the fourth annual international conference on Computational molecular biology
The program-size complexity of self-assembled squares (extended abstract)
STOC '00 Proceedings of the thirty-second annual ACM symposium on Theory of computing
Dynamic programming algorithms for RNA secondary structure prediction with pseudoknots
Discrete Applied Mathematics - Special volume on combinatorial molecular biology
Algorithms for Testing That Sets of DNA Words Concatenate without Secondary Structure
DNA8 Revised Papers from the 8th International Workshop on DNA Based Computers: DNA Computing
On the Generative Power of Multiple Context-Free Grammars and Macro Grammars
IEICE - Transactions on Information and Systems
Efficient algorithm for testing structure freeness of finite set of biomolecular sequences
DNA'05 Proceedings of the 11th international conference on DNA Computing
Testing structure freeness of regular sets of biomolecular sequences
DNA'04 Proceedings of the 10th international conference on DNA computing
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We describe several computational problems on prediction and design of RNA molecules.