Donor recognition synthesis method base on simulate anneal

Authors:
Chen Dong;Yingfei Sun
Affiliations:
School of Information Science and Engineering, Graduate University of Chinese Academy of Sciences, Beijing, P. R. of China;School of Information Science and Engineering, Graduate University of Chinese Academy of Sciences, Beijing, P. R. of China
Venue:
LSMS'07 Proceedings of the Life system modeling and simulation 2007 international conference on Bio-Inspired computational intelligence and applications
Year:
2007

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Abstract

The recognition of splicing sites is an important step in gene recognition. We introduce a synthesis method for splicing sites prediction based on short sequence pattern and long sequence pattern. There are some weights in short sequence pattern and long sequence pattern. We regulate weights by simulated anneal. Applying the method to recognize both the true and false splicing sites, the result shows true positive rate and false positive rate and compared with GeneSplicer.