Aqueous Solutions of Algorithmic Problems: Emphasizing Knights on a 3 x 3
DNA 7 Revised Papers from the 7th International Workshop on DNA-Based Computers: DNA Computing
Aqueous computing: a survey with an invitation to participate
Journal of Computer Science and Technology
Successful preparation and analysis of a 5-site 2-variable DNA library
Natural Computing: an international journal
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The concept of aqueous computing involves the use of large numbers of initially identical molecules to serve as memory registers in a fluid environment. Here, we consider a new approach to aqueous computing where modified nucleotides are used to 'write' on double-stranded DNA molecules to establish the logical values of true or false for a set of clauses. We introduce an implementation scenario where binding proteins specific to each modification can be used to selectively isolate DNA fragments with these modified nucleotides. In addition, we present initial results showing successful incorporation and detection of modifications as well as separation of modified molecules using binding proteins. As there are millions of molecules with corresponding binding proteins, this approach has the potential to yield unlimited computing power as compared with other aqueous computing methods.