A graph distance metric based on the maximal common subgraph
Pattern Recognition Letters
Reconstructing reticulate evolution in species: theory and practice
RECOMB '04 Proceedings of the eighth annual international conference on Resaerch in computational molecular biology
Phylogenetic Networks: Modeling, Reconstructibility, and Accuracy
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Metrics for Phylogenetic Networks I: Generalizations of the Robinson-Foulds Metric
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Comparison of Tree-Child Phylogenetic Networks
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
On Nakhleh's Metric for Reduced Phylogenetic Networks
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Metrics on Multilabeled Trees: Interrelationships and Diameter Bounds
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
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Phylogenetic networks are leaf-labeled, rooted, acyclic, and directed graphs that are used to model reticulate evolutionary histories. Several measures for quantifying the topological dissimilarity between two phylogenetic networks have been devised, each of which was proven to be a metric on certain restricted classes of phylogenetic networks. A biologically motivated class of phylogenetic networks, namely, reduced phylogenetic networks, was recently introduced. None of the existing measures is a metric on the space of reduced phylogenetic networks. In this paper, we provide a metric on the space of reduced phylogenetic networks that is computable in time polynomial in the size of the networks.