A Method for Registration of 3-D Shapes
IEEE Transactions on Pattern Analysis and Machine Intelligence - Special issue on interpretation of 3-D scenes—part II
Finite-Element Methods for Active Contour Models and Balloons for 2-D and 3-D Images
IEEE Transactions on Pattern Analysis and Machine Intelligence
Actin Filament Tracking Based on Particle Filters and Stretching Open Active Contour Models
MICCAI '09 Proceedings of the 12th International Conference on Medical Image Computing and Computer-Assisted Intervention: Part II
ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
Actin filament segmentation using dynamic programming
IPMI'11 Proceedings of the 22nd international conference on Information processing in medical imaging
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We introduce a novel algorithm for actin filament segmentation in a 2D TIRFM image sequence. We treat the 2D time-lapse sequence as a 3D image volume and propose an over-grown active surface model to segment the body of a filament on all slices simultaneously. In order to locate the two ends of the filament on the over-grown surface, a novel 2D spatiotemporal domain is created based on the resulting surface. Two 2D active contour models deform in this domain to locate the two filament ends accurately. Evaluation on TIRFM image sequences with very low SNRs and comparison with a previous method demonstrate the accuracy and robustness of this approach.