Deconvolution-based CT and MR brain perfusion measurement: theoretical model revisited and practical implementation details

  • Authors:
  • Andreas Fieselmann;Markus Kowarschik;Arundhuti Ganguly;Joachim Hornegger;Rebecca Fahrig

  • Affiliations:
  • Pattern Recog. Lab, Dept. of Comp. Sci., Friedrich-Alexander Univ. of Erlangen-Nuremberg, Germany and Erlangen Grad. Sch. in Adv. Optical Techn., Friedrich-Alexander Univ. of Erlangen-Nuremberg, G ...;Siemens AG, Healthcare Sector, Angiography & Interventional X-Ray Systems, Forchheim, Germany;Department of Radiology, Lucas MRS Center, Stanford University, Palo Alto, CA;Pattern Recognition Lab, Department of Computer Science, Friedrich-Alexander University of Erlangen-Nuremberg, Erlangen, Germany and Erlangen Graduate School in Advanced Optical Technologies, Frie ...;Department of Radiology, Lucas MRS Center, Stanford University, Palo Alto, CA

  • Venue:
  • Journal of Biomedical Imaging
  • Year:
  • 2011

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Abstract

Deconvolution-based analysis of CT and MR brain perfusion data is widely used in clinical practice and it is still a topic of ongoing research activities. In this paper, we present a comprehensive derivation and explanation of the underlying physiological model for intravascular tracer systems. We also discuss practical details that are needed to properly implement algorithms for perfusion analysis. Our description of the practical computer implementation is focused on the most frequently employed algebraic deconvolution methods based on the singular value decomposition. In particular, we further discuss the need for regularization in order to obtain physiologically reasonable results. We include an overview of relevant preprocessing steps and provide numerous references to the literature. We cover both CT and MR brain perfusion imaging in this paper because they share many common aspects. The combination of both the theoretical as well as the practical aspects of perfusion analysis explicitly emphasizes the simplifications to the underlying physiologicalmodel that are necessary in order to apply it to measured data acquired with current CT and MR scanners.