Communicating and mobile systems: the &pgr;-calculus
Communicating and mobile systems: the &pgr;-calculus
Information Processing Letters
Communication and Concurrency
PI-Calculus: A Theory of Mobile Processes
PI-Calculus: A Theory of Mobile Processes
Graphs for Core Molecular Biology
CMSB '03 Proceedings of the First International Workshop on Computational Methods in Systems Biology
BioAmbients: an abstraction for biological compartments
Theoretical Computer Science - Special issue: Computational systems biology
ESOP'03 Proceedings of the 12th European conference on Programming
Beta binders for biological interactions
CMSB'04 Proceedings of the 20 international conference on Computational Methods in Systems Biology
The Decidability of the Structural Congruence for Beta-binders
Electronic Notes in Theoretical Computer Science (ENTCS)
A Static Analysis for Beta-Binders
Electronic Notes in Theoretical Computer Science (ENTCS)
On the decidability and complexity of the structural congruence for beta-binders
Theoretical Computer Science
A Control Flow Analysis for Beta-binders with and without static compartments
Theoretical Computer Science
On the computational power of BlenX
Theoretical Computer Science
Modeling static biological compartments with beta-binders
AB'07 Proceedings of the 2nd international conference on Algebraic biology
An automated translation from a narrative language for biological modelling into process algebra
CMSB'07 Proceedings of the 2007 international conference on Computational methods in systems biology
WMC'07 Proceedings of the 8th international conference on Membrane computing
Modeling kohn interaction maps with beta-binders: an example
Transactions on Computational Systems Biology III
A Software Interface Between the Narrative Language and Bio-PEPA
Electronic Notes in Theoretical Computer Science (ENTCS)
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As a preliminary step in testing the expressiveness of Beta-binders against realistic case studies, we comment on a number of operational properties of the formalism and present a set of derived patterns that can be useful when modeling complex biosystems.