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Future Generation Computer Systems
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Future Generation Computer Systems
A data decomposition middleware tool with a generic built-in work-flow
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Understanding workflows for distributed computing: nitty-gritty details
WORKS '13 Proceedings of the 8th Workshop on Workflows in Support of Large-Scale Science
Characterizing workflow-based activity on a production e-infrastructure using provenance data
Future Generation Computer Systems
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Biomedical researchers can leverage Grid computing technology to address their increasing demands for data- and compute-intensive data analysis. However, usage of existing Grid infrastructures remains difficult for them. The e-infrastructure for biomedical science (e-BioInfra) is a platform with services that shield middleware complexities, in particular workflow management and monitoring. These services can be invoked from a web-based interface, called e-BioInfra Gateway, to perform large scale data analysis experiments, such that the biomedical researchers can focus on their own research problems. The gateway was designed to simplify usage both by biomedical researchers and e-BioInfra administrators, and to support straightforward extensions with new data analysis methods. In this paper we present the architecture and implementation of the gateway, also showing statistics for its usage. We also share lessons learned during the gateway development and operation. The gateway is currently used in several biomedical research projects and in teaching medical students the principles of data analysis.