CVODE, a stiff/nonstiff ODE solver in C

A Real-Time Animator for Hybrid Systems

LCTES '00 Proceedings of the ACM SIGPLAN Workshop on Languages, Compilers, and Tools for Embedded Systems

An interactive environment for scientific model construction

Proceedings of the 2nd international conference on Knowledge capture

Studies on the accuracy of time-integration methods for the radiation-diffusion equations

Journal of Computational Physics

Studies of the accuracy of time integration methods for reaction-diffusion equations

Journal of Computational Physics

Stability of operator splitting methods for systems with indefinite operators: reaction-diffusion systems

Journal of Computational Physics

PVODE, an ODE Solver for Parallel Computers

International Journal of High Performance Computing Applications

SUNDIALS: Suite of nonlinear and differential/algebraic equation solvers

ACM Transactions on Mathematical Software (TOMS) - Special issue on the Advanced CompuTational Software (ACTS) Collection

SBW - a modular framework for systems biology

Proceedings of the 38th conference on Winter simulation

A tool to improve the execution time of air quality models

Environmental Modelling & Software

Extracting constraints for process modeling

Proceedings of the 4th international conference on Knowledge capture

Inductive process modeling

Machine Learning

Reconstructing chemical reaction networks: data mining meets system identification

Proceedings of the 14th ACM SIGKDD international conference on Knowledge discovery and data mining

Analyzing the impact of computational heterogeneity on runtime performance of parallel scientific components

SpringSim '07 Proceedings of the 2007 spring simulation multiconference - Volume 2

Stability of operator splitting methods for systems with indefinite operators: Advection-diffusion-reaction systems

Journal of Computational Physics

Evolutionary Approaches for Strain Optimization Using Dynamic Models under a Metabolic Engineering Perspective

EvoBIO '09 Proceedings of the 7th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics

A Parallel Algorithm To Solve Large Stiff ODE Systems On Grid Systems

International Journal of High Performance Computing Applications

A Software Tool for the Simulation and Optimization of Dynamic Metabolic Models

IWANN '09 Proceedings of the 10th International Work-Conference on Artificial Neural Networks: Part II: Distributed Computing, Artificial Intelligence, Bioinformatics, Soft Computing, and Ambient Assisted Living

Short communication: The FEOM technique applied to a three-dimensional model of diffusion/advection of pollutants

Environmental Modelling & Software

Learning declarative bias

ILP'07 Proceedings of the 17th international conference on Inductive logic programming

A high-order low-Mach number AMR construction for chemically reacting flows

Journal of Computational Physics

Dynamic structured partitioning for parallel scientific applications with pointwise varying workloads

IPDPS'06 Proceedings of the 20th international conference on Parallel and distributed processing

Optimal trajectory approximation by cubic splines on fed-batch control problems

ICOSSE'06 Proceedings of the 5th WSEAS international conference on System science and simulation in engineering

Generalized McCormick relaxations

Journal of Global Optimization

A dependency-driven formulation of parareal: parallel-in-time solution of PDEs as a many-task application

Proceedings of the 2011 ACM international workshop on Many task computing on grids and supercomputers

Asynchronous iterative algorithms for computational science on the grid: three case studies

VECPAR'04 Proceedings of the 6th international conference on High Performance Computing for Computational Science

Event-based parareal: A data-flow based implementation of parareal

Journal of Computational Physics

Simulation-based optimal Bayesian experimental design for nonlinear systems

Journal of Computational Physics

Parameterization for distributed watershed modeling using national data and evolutionary algorithm

Computers & Geosciences

Improved relaxations for the parametric solutions of ODEs using differential inequalities

Journal of Global Optimization

Adaptive step ODE algorithms for the 3D simulation of electric heart activity with graphics processing units

Computers in Biology and Medicine