Fronts propagating with curvature-dependent speed: algorithms based on Hamilton-Jacobi formulations
Journal of Computational Physics
International Journal of Computer Vision
Fast Approximate Energy Minimization via Graph Cuts
IEEE Transactions on Pattern Analysis and Machine Intelligence
Mean Shift: A Robust Approach Toward Feature Space Analysis
IEEE Transactions on Pattern Analysis and Machine Intelligence
International Journal of Computer Vision
Variational level-set with gaussian shape model for cell segmentation
ICIP'09 Proceedings of the 16th IEEE international conference on Image processing
A bottom-up and top-down model for cell segmentation using multispectral data
ISBI'10 Proceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro
A Fast Approach for Pixelwise Labeling of Facade Images
ICPR '10 Proceedings of the 2010 20th International Conference on Pattern Recognition
Distance regularized level set evolution and its application to image segmentation
IEEE Transactions on Image Processing
Efficient Gaussian process classification using random decision forests
Pattern Recognition and Image Analysis
Seeded watersheds for combined segmentation and tracking of cells
ICIAP'05 Proceedings of the 13th international conference on Image Analysis and Processing
IEEE Transactions on Image Processing
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In this paper, we tackle the problem of finding microorganisms in bright field microscopy images, which is an important and challenging step in various tasks, like classifying soil textures. Apart from bacteria or fungi, these images can contain impurities such as sand particles, which increase the difficulty of microbe detection. Following a semantic segmentation approach, where a label is inferred for each pixel, we achieve encouraging classification results on a database containing five different types of microbes. We review and evaluate multiple techniques including segment classification, conditional random field models, and level set approaches.