Integer and combinatorial optimization
Integer and combinatorial optimization
LEDA: a platform for combinatorial and geometric computing
Communications of the ACM
A branch-and-cut approach to physical mapping with end-probes
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
A branch-and-cut algorithm for multiple sequence alignment
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Edit distance between two RNA structures
RECOMB '01 Proceedings of the fifth annual international conference on Computational biology
The longest common subsequence problem for sequences with nested arc annotations
Journal of Computer and System Sciences - Computational biology 2002
Alignment between Two RNA Structures
MFCS '01 Proceedings of the 26th International Symposium on Mathematical Foundations of Computer Science
Generalization of a Suffix Tree for RNA Structural Pattern Matching
SWAT '00 Proceedings of the 7th Scandinavian Workshop on Algorithm Theory
The Longest Common Subsequence Problem for Sequences with Nested Arc Annotations
ICALP '01 Proceedings of the 28th International Colloquium on Automata, Languages and Programming,
Finding Common Subsequences with Arcs and Pseudoknots
CPM '99 Proceedings of the 10th Annual Symposium on Combinatorial Pattern Matching
The Longest Common Subsequence Problem for Arc-Annotated Sequences
COM '00 Proceedings of the 11th Annual Symposium on Combinatorial Pattern Matching
Algorithmic Aspects of Protein Structure Similarity
FOCS '99 Proceedings of the 40th Annual Symposium on Foundations of Computer Science
Local gapped subforest alignment and its application in finding RNA structural motifs
ISAAC'04 Proceedings of the 15th international conference on Algorithms and Computation
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