The multiple sequence alignment problem in biology
SIAM Journal on Applied Mathematics
Combinatorial pattern discovery for scientific data: some preliminary results
SIGMOD '94 Proceedings of the 1994 ACM SIGMOD international conference on Management of data
The Complexity of Some Problems on Subsequences and Supersequences
Journal of the ACM (JACM)
Enumerating and Ranking Discrete Motifs
Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology
A Double Combinatorial Approach to Discovering Patterns in Biological Sequences
CPM '96 Proceedings of the 7th Annual Symposium on Combinatorial Pattern Matching
Systematic and automated discovery of patterns in PROSITE families
RECOMB '00 Proceedings of the fourth annual international conference on Computational molecular biology
SODA '00 Proceedings of the eleventh annual ACM-SIAM symposium on Discrete algorithms
Finding motifs using random projections
RECOMB '01 Proceedings of the fifth annual international conference on Computational biology
Some Results on Flexible-Pattern Discovery
COM '00 Proceedings of the 11th Annual Symposium on Combinatorial Pattern Matching
An Output-Sensitive Flexible Pattern Discovery Algorithm
CPM '01 Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching
Particle Swarm Optimisation for Protein Motif Discovery
Genetic Programming and Evolvable Machines
IBM Systems Journal - Deep computing for the life sciences
An inexact-suffix-tree-based algorithm for detecting extensible patterns
Theoretical Computer Science - Pattern discovery in the post genome
An Exploratory Study of Database Integration Processes
IEEE Transactions on Knowledge and Data Engineering
DELPHI: a pattern-based method for detecting sequence similarity
IBM Journal of Research and Development
VARUN: Discovering Extensible Motifs under Saturation Constraints
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
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