transsys: A Generic Formalism for Modelling Regulatory Networks in Morphogenesis

Authors:
Jan T. Kim
Affiliations:
-
Venue:
ECAL '01 Proceedings of the 6th European Conference on Advances in Artificial Life
Year:
2001

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Abstract

The formal language transsys is introduced as a tool for comprehensively representing regulatory gene networks in a way that makes them accessible to ALife modelling. As a first application, Linden-mayer systems are enhanced by integration with transsys. The resulting formalism, called L-transsys, is used to implement the ABC model of flower morphogenesis. This transsys ABC model is extensible and allows dynamical modelling on the molecular and on the morphological level.