Genes, Themes, and Microarrays: Using Information Retrieval for Large-Scale Gene Analysis

Classification of Gene Expression Data in an Ontology

ISMDA '01 Proceedings of the Second International Symposium on Medical Data Analysis

Computational Biology at the Beginning of the Post-genomic Era

Informatics - 10 Years Back. 10 Years Ahead.

On the potential of domain literature for clustering and Bayesian network learning

Proceedings of the eighth ACM SIGKDD international conference on Knowledge discovery and data mining

Inclusion of Textual Documentation in the Analysis of Multidimensional Data Sets: Application to Gene Expression Data

Machine Learning

Biological applications of multi-relational data mining

ACM SIGKDD Explorations Newsletter

Text mining: generating hypotheses from MEDLINE

Journal of the American Society for Information Science and Technology

Constructing an associative concept space for literature-based discovery

Journal of the American Society for Information Science and Technology

Annotating protein function through lexical analysis

AI Magazine

GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data

Journal of Biomedical Informatics

Gene Ontology Friendly Biclustering of Expression Profiles

CSB '04 Proceedings of the 2004 IEEE Computational Systems Bioinformatics Conference

Clustering Genes Using Gene Expression and Text Literature Data

CSB '05 Proceedings of the 2005 IEEE Computational Systems Bioinformatics Conference

Biomedical knowledge navigation by literature clustering

Journal of Biomedical Informatics

Mining scientific literature to predict new relationships

Intelligent Data Analysis

GE-Miner: integration of cluster ensemble and text mining for comprehensive gene expression analysis

International Journal of Bioinformatics Research and Applications

A Bayesian framework for knowledge driven regression model in micro-array data analysis

International Journal of Data Mining and Bioinformatics

A Bayesian framework for knowledge driven regression model in micro-array data analysis

International Journal of Data Mining and Bioinformatics

Mining Association Rule Bases from Integrated Genomic Data and Annotations

Computational Intelligence Methods for Bioinformatics and Biostatistics

Microarray gene cluster identification and annotation through cluster ensemble and EM-based informative textual summarization

IEEE Transactions on Information Technology in Biomedicine - Special section on computational intelligence in medical systems

A knowledge-driven method to evaluate multi-source clustering

ISPA'05 Proceedings of the 2005 international conference on Parallel and Distributed Processing and Applications

A coherent biomedical literature clustering and summarization approach through ontology-enriched graphical representations

DaWaK'06 Proceedings of the 8th international conference on Data Warehousing and Knowledge Discovery

Combining semantic relations and DNA microarray data for novel hypotheses generation

ISMB/ECCB'09 Proceedings of the 2009 workshop of the BioLink Special Interest Group, international conference on Linking Literature, Information, and Knowledge for Biology

Supervised learning in the gene ontology part II: a bottom-up algorithm

Transactions on Rough Sets IV

A complex bio-networks of the function profile of genes

Transactions on Computational Systems Biology V