String searching algorithms
Algorithms on strings, trees, and sequences: computer science and computational biology
Algorithms on strings, trees, and sequences: computer science and computational biology
Pattern matching algorithms
Journal of the ACM (JACM)
A guided tour to approximate string matching
ACM Computing Surveys (CSUR)
Data structuring application for string problems in biological sequences
ICCMSE '03 Proceedings of the international conference on Computational methods in sciences and engineering
Longest repeats with a block of k don't cares
Theoretical Computer Science
Algorithms for extracting motifs from biological weighted sequences
Journal of Discrete Algorithms
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A molecular sequence "model" is a (structured) sequence of distinct or identical strings separated by gaps; here we design and analyze efficient algorithms for variations of the "Model Matching" and "Model Identification" problems.