New indices for text: PAT Trees and PAT arrays
Information retrieval
Suffix arrays: a new method for on-line string searches
SIAM Journal on Computing
Software—Practice & Experience
Text algorithms
Algorithms on strings, trees, and sequences: computer science and computational biology
Algorithms on strings, trees, and sequences: computer science and computational biology
The string B-tree: a new data structure for string search in external memory and its applications
Journal of the ACM (JACM)
Grouper: a dynamic clustering interface to Web search results
WWW '99 Proceedings of the eighth international conference on World Wide Web
Fast algorithms for sorting and searching strings
SODA '97 Proceedings of the eighth annual ACM-SIAM symposium on Discrete algorithms
STOC '00 Proceedings of the thirty-second annual ACM symposium on Theory of computing
Reducing the space requirement of suffix trees
Software—Practice & Experience
On the sorting-complexity of suffix tree construction
Journal of the ACM (JACM)
An experimental study of an opportunistic index
SODA '01 Proceedings of the twelfth annual ACM-SIAM symposium on Discrete algorithms
An analysis of the Burrows—Wheeler transform
Journal of the ACM (JACM)
Compressed Text Databases with Efficient Query Algorithms Based on the Compressed Suffix Array
ISAAC '00 Proceedings of the 11th International Conference on Algorithms and Computation
On the Performance of BWT Sorting Algorithms
DCC '00 Proceedings of the Conference on Data Compression
Opportunistic data structures with applications
FOCS '00 Proceedings of the 41st Annual Symposium on Foundations of Computer Science
Rapid identification of repeated patterns in strings, trees and arrays
STOC '72 Proceedings of the fourth annual ACM symposium on Theory of computing
An Efficient Method for in Memory Construction of Suffix Arrays
SPIRE '99 Proceedings of the String Processing and Information Retrieval Symposium & International Workshop on Groupware
Antisequential Suffix Sorting for BWT-Based Data Compression
IEEE Transactions on Computers
Software—Practice & Experience
Scalable parallel suffix array construction
Parallel Computing
Better external memory suffix array construction
Journal of Experimental Algorithmics (JEA)
An Alignment-Free Distance Measure for Closely Related Genomes
RECOMB-CG '08 Proceedings of the international workshop on Comparative Genomics
New Frontiers in Applied Data Mining
Fast lightweight suffix array construction and checking
CPM'03 Proceedings of the 14th annual conference on Combinatorial pattern matching
Post BWT stages of the Burrows–Wheeler compression algorithm
Software—Practice & Experience
Scalable parallel suffix array construction
EuroPVM/MPI'06 Proceedings of the 13th European PVM/MPI User's Group conference on Recent advances in parallel virtual machine and message passing interface
ICALP'07 Proceedings of the 34th international conference on Automata, Languages and Programming
Optimal lightweight construction of suffix arrays for constant alphabets
WADS'07 Proceedings of the 10th international conference on Algorithms and Data Structures
Parallel suffix array and least common prefix for the GPU
Proceedings of the 18th ACM SIGPLAN symposium on Principles and practice of parallel programming
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