Aligning sequences via an evolutionary tree: complexity and approximation
STOC '94 Proceedings of the twenty-sixth annual ACM symposium on Theory of computing
A more efficient approximation scheme for tree alignment
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Near optimal multiple alignment within a band in polynomial time
STOC '00 Proceedings of the thirty-second annual ACM symposium on Theory of computing
Parametric Multiple Sequence Alignment and Phylogeny Construction
COM '00 Proceedings of the 11th Annual Symposium on Combinatorial Pattern Matching
GESTALT: Genomic Steiner Alignments
CPM '99 Proceedings of the 10th Annual Symposium on Combinatorial Pattern Matching
The consensus string problem for a metric is NP-complete
Journal of Discrete Algorithms
The visual comparison of three sequences
VIS '91 Proceedings of the 2nd conference on Visualization '91
Multiple Sequence Alignment with Evolutionary Computation
Genetic Programming and Evolvable Machines
Parallel Multiple Sequences Alignment in SMP Cluster
HPCASIA '05 Proceedings of the Eighth International Conference on High-Performance Computing in Asia-Pacific Region
Near optimal multiple alignment within a band in polynomial time
Journal of Computer and System Sciences
On the minimum common integer partition problem
ACM Transactions on Algorithms (TALG)
Approximation algorithms for constrained generalized tree alignment problem
Discrete Applied Mathematics
Consensus Optimizing Both Distance Sum and Radius
SPIRE '09 Proceedings of the 16th International Symposium on String Processing and Information Retrieval
Multiple sequence alignment using a genetic algorithm and GLOCSA
Journal of Artificial Evolution and Applications - Special issue on artificial evolution methods in the biological and biomedical sciences
On the bottleneck tree alignment problems
Information Sciences: an International Journal
Evolving consensus sequence for multiple sequence alignment with a genetic algorithm
GECCO'03 Proceedings of the 2003 international conference on Genetic and evolutionary computation: PartII
A maximum-likelihood formulation and EM algorithm for the protein multiple alignment problem
PRIB'10 Proceedings of the 5th IAPR international conference on Pattern recognition in bioinformatics
Parallel implementation and performance characterization of MUSCLE
IPDPS'06 Proceedings of the 20th international conference on Parallel and distributed processing
ICARIS'06 Proceedings of the 5th international conference on Artificial Immune Systems
On the minimum common integer partition problem
CIAC'06 Proceedings of the 6th Italian conference on Algorithms and Complexity
A polynomial time solvable formulation of multiple sequence alignment
RECOMB'05 Proceedings of the 9th Annual international conference on Research in Computational Molecular Biology
Refining the progressive multiple sequence alignment score using genetic algorithms
TAINN'05 Proceedings of the 14th Turkish conference on Artificial Intelligence and Neural Networks
The computation of consensus patterns in DNA sequences
Mathematical and Computer Modelling: An International Journal
A bibliography on computational molecular biology and genetics
Mathematical and Computer Modelling: An International Journal
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