Algorithms for approximate string matching
Information and Control
Trees, stars, and multiple biological sequence alignment
SIAM Journal on Applied Mathematics
Multiple alignment, communication cost, and graph matching
SIAM Journal on Applied Mathematics
Randomized algorithms
Algorithms on strings, trees, and sequences: computer science and computational biology
Algorithms on strings, trees, and sequences: computer science and computational biology
Improved approximation algorithms for tree alignment
Journal of Algorithms
Progressive multiple alignment with constraints
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Finding similar regions in many strings
STOC '99 Proceedings of the thirty-first annual ACM symposium on Theory of computing
A polynomial time approximation scheme for minimum routing cost spanning trees
Proceedings of the ninth annual ACM-SIAM symposium on Discrete algorithms
A polyhedral approach to sequence alignment problems
Discrete Applied Mathematics - Special volume on combinatorial molecular biology
Approximation Algorithms for Multiple Sequence Alignment
CPM '94 Proceedings of the 5th Annual Symposium on Combinatorial Pattern Matching
The longest common subsequence problem for sequences with nested arc annotations
Journal of Computer and System Sciences - Computational biology 2002
The Longest Common Subsequence Problem for Sequences with Nested Arc Annotations
ICALP '01 Proceedings of the 28th International Colloquium on Automata, Languages and Programming,
CPM '02 Proceedings of the 13th Annual Symposium on Combinatorial Pattern Matching
Inferring an original sequence from erroneous copies: a Bayesian approach
APBC '03 Proceedings of the First Asia-Pacific bioinformatics conference on Bioinformatics 2003 - Volume 19
Computing the similarity of two sequences with nested arc annotations
Theoretical Computer Science
Finding the biologically optimal alignment of multiple sequences
Artificial Intelligence in Medicine
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