Sparse dynamic programming I: linear cost functions
Journal of the ACM (JACM)
Sparse dynamic programming II: convex and concave cost functions
Journal of the ACM (JACM)
Shortest path in complete bipartite digraph problem and its applications
SODA '97 Proceedings of the eighth annual ACM-SIAM symposium on Discrete algorithms
Linear and O(n log n) time minimum-cost matching algorithms for quasi-convex tours
SODA '94 Proceedings of the fifth annual ACM-SIAM symposium on Discrete algorithms
Reconstructing a history of recombinations from a set of sequences
SODA '94 Proceedings of the fifth annual ACM-SIAM symposium on Discrete algorithms
SODA '90 Proceedings of the first annual ACM-SIAM symposium on Discrete algorithms
A sub-quadratic sequence alignment algorithm for unrestricted cost matrices
SODA '02 Proceedings of the thirteenth annual ACM-SIAM symposium on Discrete algorithms
Information Processing Letters
Sparse LCS common substring alignment
Information Processing Letters
Speech recognition in parallel
HLT '89 Proceedings of the workshop on Speech and Natural Language
Cache-oblivious dynamic programming
SODA '06 Proceedings of the seventeenth annual ACM-SIAM symposium on Discrete algorithm
Learning Models for Aligning Protein Sequences with Predicted Secondary Structure
RECOMB 2'09 Proceedings of the 13th Annual International Conference on Research in Computational Molecular Biology
A high-throughput approach for associating microRNAs with their activity conditions
RECOMB'05 Proceedings of the 9th Annual international conference on Research in Computational Molecular Biology
Online dynamic programming speedups
WAOA'06 Proceedings of the 4th international conference on Approximation and Online Algorithms
A study of accessible motifs and RNA folding complexity
RECOMB'06 Proceedings of the 10th annual international conference on Research in Computational Molecular Biology
High-quality pagination for publishing
Software—Practice & Experience
A bibliography on computational molecular biology and genetics
Mathematical and Computer Modelling: An International Journal
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