An algorithm to align words for historical comparison
Computational Linguistics
A branch-and-cut algorithm for multiple sequence alignment
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Bioinformatics and Constraints
Constraints
Accurate detection of very sparse sequence motifs
RECOMB '03 Proceedings of the seventh annual international conference on Research in computational molecular biology
Segment Match Refinement and Applications
WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
RECOMB '04 Proceedings of the eighth annual international conference on Resaerch in computational molecular biology
Alignment of multiple languages for historical comparison
COLING '98 Proceedings of the 17th international conference on Computational linguistics - Volume 1
Integer programming models for computational biology problems
Journal of Computer Science and Technology - Special issue on bioinformatics
Inverse parametric sequence alignment
Journal of Algorithms
A graph approach to the threshold all-against-all substring matching problem
Journal of Experimental Algorithmics (JEA)
PROBCONS: probabilistic consistency-based multiple alignment of amino acid sequences
AAAI'04 Proceedings of the 19th national conference on Artifical intelligence
Heuristic algorithms in computational molecular biology
Journal of Computer and System Sciences
A polynomial time solvable formulation of multiple sequence alignment
RECOMB'05 Proceedings of the 9th Annual international conference on Research in Computational Molecular Biology
An adaptive and iterative algorithm for refining multiple sequence alignment
Computational Biology and Chemistry
Efficient Parallel Implementations of Multiple Sequence Alignment using BSP/CGM Model
Proceedings of Programming Models and Applications on Multicores and Manycores
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