A Pragmatic Information Extraction Strategy for Gathering Data on Genetic Interactions
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology
Applications of Finite-State Transducers in Natural Language Processing
CIAA '00 Revised Papers from the 5th International Conference on Implementation and Application of Automata
Robustness beyond shallowness: incremental deep parsing
Natural Language Engineering
A practical part-of-speech tagger
ANLC '92 Proceedings of the third conference on Applied natural language processing
Regular expressions for language engineering
Natural Language Engineering
Partial parsing via finite-state cascades
Natural Language Engineering
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In this paper, we describe ongoing work (in the framework of the project BioMiRe) in automatic detection of gene and protein names in biomedical texts. The approach adopted here is one based on robust linguistic analysis of these texts. The first part will show the specific problems encountered in the corpora, from the lexical and syntactic points of view. Then we will describe how the tools we use for linguistic processing perform our task. The problem of evaluation will then be addressed and our first results will be given. Finally, we will sketch how we intend to continue the work.