A Pragmatic Information Extraction Strategy for Gathering Data on Genetic Interactions

Challenges for Intelligent Systems in Biology

IEEE Intelligent Systems

The Frame-Based Module of the SUISEKI Information Extraction System

IEEE Intelligent Systems

Eight Questions about Semantic Web Annotations

IEEE Intelligent Systems

Linguistic Processing of Biomedical Texts

PorTAL '02 Proceedings of the Third International Conference on Advances in Natural Language Processing

BioMap: toward the development of a knowledge base of biomedical literature

Proceedings of the 2004 ACM symposium on Applied computing

Robustness beyond shallowness: incremental deep parsing

Natural Language Engineering

PathwayFinder: paving the way towards automatic pathway extraction

APBC '04 Proceedings of the second conference on Asia-Pacific bioinformatics - Volume 29

A comparison of parsing technologies for the biomedical domain

Natural Language Engineering

Biomedical named entity recognition using two-phase model based on SVMs

Journal of Biomedical Informatics - Special issue: Named entity recognition in biomedicine

Optimizing syntax patterns for discovering protein-protein interactions

Proceedings of the 2005 ACM symposium on Applied computing

Tuning support vector machines for biomedical named entity recognition

BioMed '02 Proceedings of the ACL-02 workshop on Natural language processing in the biomedical domain - Volume 3

Combining labelled and unlabelled data: a case study on fisher kernels and transductive inference for biological entity recognition

COLING-02 proceedings of the 6th conference on Natural language learning - Volume 20

Methodological Review: Extracting interactions between proteins from the literature

Journal of Biomedical Informatics

Comparative experiments on learning information extractors for proteins and their interactions

Artificial Intelligence in Medicine

MinePhos: A Literature Mining System for Protein Phoshphorylation Information Extraction

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

Unsupervised event extraction from biomedical literature using co-occurrence information and basic patterns

IJCNLP'04 Proceedings of the First international joint conference on Natural Language Processing

KXtractor: an effective biomedical information extraction technique based on mixture hidden markov models

Transactions on Computational Systems Biology II

Using literature and data to learn Bayesian networks as clinical models of ovarian tumors

Artificial Intelligence in Medicine