Tree graphs of RNA secondary structures and their comparisons

On the Pattern Recognition of Noisy Subsequence Trees

IEEE Transactions on Pattern Analysis and Machine Intelligence

Computing similarity between RNA structures

Theoretical Computer Science

A Fast Algorithm for Optimal Alignment between Similar Ordered Trees

CPM '01 Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching

Computing Similarity between RNA Structures

CPM '99 Proceedings of the 10th Annual Symposium on Combinatorial Pattern Matching

Spectral Decomposition of the Laplacian Matrix Applied to RNA Folding Prediction

CSB '03 Proceedings of the IEEE Computer Society Conference on Bioinformatics

Local Similarity in RNA Secondary Structures

CSB '03 Proceedings of the IEEE Computer Society Conference on Bioinformatics

A fast algorithm for optimal alignment between similar ordered trees

Fundamenta Informaticae - Special issue on computing patterns in strings

Fine-Grain Matrix Graph Representation for Predicting Mutations Leading to Conformational Rearrangements in Small RNAs

CSB '04 Proceedings of the 2004 IEEE Computational Systems Bioinformatics Conference

Contraction Graphs for Representation and Analysis of RNA Secondary Structure

CSB '04 Proceedings of the 2004 IEEE Computational Systems Bioinformatics Conference

Pure Multiple RNA Secondary Structure Alignments: A Progressive Profile Approach

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

Towards a Weighted-Tree Similarity Algorithm for RNA Secondary Structure Comparison

HPCASIA '05 Proceedings of the Eighth International Conference on High-Performance Computing in Asia-Pacific Region

Structural analysis of single-point mutations given an RNA sequence: a case study with RNAMute

EURASIP Journal on Applied Signal Processing

Seeded Tree Alignment

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

A common viewpoint on broad kernel filtering and nonlinear diffusion

Scale Space'03 Proceedings of the 4th international conference on Scale space methods in computer vision

A bibliography on computational molecular biology and genetics

Mathematical and Computer Modelling: An International Journal

A Fast Algorithm for Optimal Alignment between Similar Ordered Trees

Fundamenta Informaticae - Computing Patterns in Strings

Seeded tree alignment and planar tanglegram layout

WABI'07 Proceedings of the 7th international conference on Algorithms in Bioinformatics

Research Article: On topological indices for small RNA graphs

Computational Biology and Chemistry

RNA Secondary Structure Prediction Using Soft Computing

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)