An event-covering method for effective probabilistic inference
Pattern Recognition
The multiple sequence alignment problem in biology
SIAM Journal on Applied Mathematics
Tree graphs of RNA secondary structures and their comparisons
Computers and Biomedical Research
Simple fast algorithms for the editing distance between trees and related problems
SIAM Journal on Computing
Alignment of trees: an alternative to tree edit
Theoretical Computer Science
Ordered and Unordered Tree Inclusion
SIAM Journal on Computing
The Tree-to-Tree Correction Problem
Journal of the ACM (JACM)
The complexity of multiple sequence alignment with SP-score that is a metric
Theoretical Computer Science
Computing Similarity Between RNA Secondary Structures
INTSYS '98 Proceedings of the IEEE International Joint Symposia on Intelligence and Systems
Local Similarity in RNA Secondary Structures
CSB '03 Proceedings of the IEEE Computer Society Conference on Bioinformatics
RNA Secondary structure comparison: exact analysis of the Zhang--Shasha tree edit algorithm
Theoretical Computer Science
Recognition of Shapes by Editing Their Shock Graphs
IEEE Transactions on Pattern Analysis and Machine Intelligence
Automatic web news extraction using tree edit distance
Proceedings of the 13th international conference on World Wide Web
Analysis of tree edit distance algorithms
CPM'03 Proceedings of the 14th annual conference on Combinatorial pattern matching
A New Distance for High Level RNA Secondary Structure Comparison
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Computational Biology and Chemistry
Forest alignment with affine gaps and anchors
CPM'11 Proceedings of the 22nd annual conference on Combinatorial pattern matching
A Memory Efficient Method for Structure-Based RNA Multiple Alignment
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Forest alignment with affine gaps and anchors, applied in RNA structure comparison
Theoretical Computer Science
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