The 3D visualization of brain anatomy from diffusion-weighted magnetic resonance imaging data

  • Authors:
  • Burkhard C. Wünsche;Richard Lobb

  • Affiliations:
  • University of Auckland, Auckland, New Zealand;University of Auckland, Auckland, New Zealand

  • Venue:
  • Proceedings of the 2nd international conference on Computer graphics and interactive techniques in Australasia and South East Asia
  • Year:
  • 2004

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Abstract

A common problem in biomedical sciences is the in vivo identification and analysis of anatomical structures. This paper introduces several novel techniques to identify and visualize nerve fiber tracts and different tissue types using diffusion-weighted magnetic resonance imaging data. Barycentric color maps allow an integrated view of different types of diffusion anisotropy. Ellipsoid-based textures and Anisotropy Modulated Line Integral Convolution create images segmented by tissue type and incorporating a texture representing the 3D orientation of nerve fibers. Finally streamtubes and hyperstreamlines represent the full 3D structure of nerve fiber tracts and their inherent diffusion properties. The effectiveness of the exploration approach and the new visualization techniques are demonstrated by identifying various anatomical structures and features from a diffusion tensor data set of a healthy brain.