Life sciences grid in EUROGRID and GRIP projects

Authors:
Jarosław Wypychowski;Jarosław Pytliński;Łukasz Skorwider;Mirosław Nazaruk;Krzysztof Benedyczak;Michal Wroński;Piotr Bała
Affiliations:
ICM Warsaw University, Pawińskiego 5a, 02-106 Warsaw, Poland;ICM Warsaw University, Pawińskiego 5a, 02-106 Warsaw, Poland;ICM Warsaw University, Pawińskiego 5a, 02-106 Warsaw, Poland;ICM Warsaw University, Pawińskiego 5a, 02-106 Warsaw, Poland;Nicolaus Copernicus University, Chopina 12/18, 87-100 Toruń, Poland;Nicolaus Copernicus University, Chopina 12/18, 87-100 Torun, Poland;Nicolaus Copernicus University, Chopina 12/18, 87-100 Torun, Poland
Venue:
New Generation Computing - Grid systems for life sciences
Year:
2004

Citing 5
Cited 3

The grid: blueprint for a new computing infrastructure

The grid: blueprint for a new computing infrastructure
NAMD2: greater scalability for parallel molecular dynamics

Journal of Computational Physics - Special issue on computational molecular biophysics
The Open Grid Services Architecture: Where the Grid Meets the Web

IEEE Internet Computing
BioGRID " An European Grid for Molecular Biology

HPDC '02 Proceedings of the 11th IEEE International Symposium on High Performance Distributed Computing
EUROGRID: European computational grid testbed

Journal of Parallel and Distributed Computing - Special issue on computational grids

Real-Time visualization in the grid using UNICORE middleware

PPAM'05 Proceedings of the 6th international conference on Parallel Processing and Applied Mathematics
UNICORE as uniform grid environment for life sciences

EGC'05 Proceedings of the 2005 European conference on Advances in Grid Computing
Seamless access to the PL-Grid e-infrastructure using UNICORE middleware

Building a National Distributed e-Infrastructure - PL-Grid

Quantified Score

Hi-index	0.00

Visualization

Abstract

In this paper we describe deployment of most important life sciences applications on the grid. The build grid is heterogenous and consist of systems of different architecture as well as operating systems and various middleware. We have used UNICORE infrastructure as framework for development dedicated user interface to the number of existing computational chemistry codes and molecular biology databases. Developed solution allows for access to the resources provided with UNICORE as well as Globus with exactly the same interface which gives access to the general grid functionality such as single login, job submission and control mechanism.