TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources
ISMB '98 Proceedings of the 6th International Conference on Intelligent Systems for Molecular Biology
The LiLFeS Abstract Machine and its evaluation with the LinGO grammar
Natural Language Engineering
Hierarchical clustering of words
COLING '96 Proceedings of the 16th conference on Computational linguistics - Volume 2
Automatic discovery of term similarities using pattern mining
COMPUTERM '02 COLING-02 on COMPUTERM 2002: second international workshop on computational terminology - Volume 14
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JNLPBA '04 Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications
Journal of Biomedical Informatics
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In this paper we propose an integrated knowledge management system in which terminology-based knowledge acquisition, knowledge integration, and XML-based knowledge retrieval are combined using tag information and ontology management tools. The main objective of the system is to facilitate knowledge acquisition through query answering against XML-based documents in the domain of molecular biology. Our system integrates automatic term recognition, term variation management, context-based automatic term clustering, ontology-based inference, and intelligent tag information retrieval. Tag-based retrieval is implemented through interval operations, which prove to be a powerful means for textual mining and knowledge acquisition. The aim is to provide efficient access to heterogeneous biological textual data and databases, enabling users to integrate a wide range of textual and non-textual resources effortlessly.