Identification of tuberculosis bacteria based on shape and color

  • Authors:
  • Manuel G. Forero;Filip Sroubek;Gabriel Cristóbal

  • Affiliations:
  • Instituto de íptica (CSIC), Serrano 121 28006, Madrid, Spain;Institute of Information Theory and Automation, Academy of Sciences of the Czech Republic, Prague, Czech Republic;Instituto de íptica (CSIC), Serrano 121 28006, Madrid, Spain

  • Venue:
  • Real-Time Imaging - Special issue on imaging in bioinformatics: Part III
  • Year:
  • 2004

Quantified Score

Hi-index 0.00

Visualization

Abstract

Tuberculosis and other mycobacteriosis are serious illnesses which control is based on early diagnosis. A technique commonly used consists of analyzing sputum images for detecting bacilli. However, the analysis of sputum is time consuming and requires highly trained personnel to avoid high errors. Image-processing techniques provide a good tool for improving the manual screening of samples. In this paper, a new autofocus algorithm and a new bacilli detection technique is presented with the aim to attain a high specificity rate and reduce the time consumed to analyze such sputum samples. This technique is based on the combined use of some invariant shape features together with a simple thresholding operation on the chromatic channels. Some feature descriptors have been extracted from bacilli shape using an edited dataset of samples. A k-means clustering technique was applied for classification purposes and the sensitivity vs specificity results were evaluated using a standard ROC analysis procedure.