An Algorithm that Learns What‘s in a Name
Machine Learning - Special issue on natural language learning
Snowball: extracting relations from large plain-text collections
DL '00 Proceedings of the fifth ACM conference on Digital libraries
A study of smoothing methods for language models applied to Ad Hoc information retrieval
Proceedings of the 24th annual international ACM SIGIR conference on Research and development in information retrieval
Information Extraction with HMM Structures Learned by Stochastic Optimization
Proceedings of the Seventeenth National Conference on Artificial Intelligence and Twelfth Conference on Innovative Applications of Artificial Intelligence
A new statistical parser based on bigram lexical dependencies
ACL '96 Proceedings of the 34th annual meeting on Association for Computational Linguistics
The descent of hierarchy, and selection in relational semantics
ACL '02 Proceedings of the 40th Annual Meeting on Association for Computational Linguistics
Kernel methods for relation extraction
EMNLP '02 Proceedings of the ACL-02 conference on Empirical methods in natural language processing - Volume 10
Representing sentence structure in hidden Markov models for information extraction
IJCAI'01 Proceedings of the 17th international joint conference on Artificial intelligence - Volume 2
Opinion observer: analyzing and comparing opinions on the Web
WWW '05 Proceedings of the 14th international conference on World Wide Web
Simple algorithms for complex relation extraction with applications to biomedical IE
ACL '05 Proceedings of the 43rd Annual Meeting on Association for Computational Linguistics
Multi-way relation classification: application to protein-protein interactions
HLT '05 Proceedings of the conference on Human Language Technology and Empirical Methods in Natural Language Processing
Measures of semantic similarity and relatedness in the biomedical domain
Journal of Biomedical Informatics
Semantic role labeling: an introduction to the special issue
Computational Linguistics
Unsupervised Discovery of Compound Entities for Relationship Extraction
EKAW '08 Proceedings of the 16th international conference on Knowledge Engineering: Practice and Patterns
Psychiatric document retrieval using a discourse-aware model
Artificial Intelligence
Proceedings of the 2009 ACM symposium on Applied Computing
A survey on sentiment detection of reviews
Expert Systems with Applications: An International Journal
Unsupervised Learning of Semantic Relations for Molecular Biology Ontologies
Proceedings of the 2008 conference on Ontology Learning and Population: Bridging the Gap between Text and Knowledge
Mining and re-ranking for answering biographical queries on the web
AAAI'06 proceedings of the 21st national conference on Artificial intelligence - Volume 2
Broad-coverage sense disambiguation and information extraction with a supersense sequence tagger
EMNLP '06 Proceedings of the 2006 Conference on Empirical Methods in Natural Language Processing
TSD '09 Proceedings of the 12th International Conference on Text, Speech and Dialogue
Open information extraction from the web
IJCAI'07 Proceedings of the 20th international joint conference on Artifical intelligence
Building a semantically annotated corpus of clinical texts
Journal of Biomedical Informatics
Comparison of similarity models for the relation discovery task
LD '06 Proceedings of the Workshop on Linguistic Distances
Unsupervised learning of semantic relations between concepts of a molecular biology ontology
IJCAI'05 Proceedings of the 19th international joint conference on Artificial intelligence
Journal of Biomedical Informatics
Semantic relations for problem-oriented medical records
Artificial Intelligence in Medicine
Disease mention recognition with specific features
BioNLP '10 Proceedings of the 2010 Workshop on Biomedical Natural Language Processing
Extraction of disease-treatment semantic relations from biomedical sentences
BioNLP '10 Proceedings of the 2010 Workshop on Biomedical Natural Language Processing
Automatic integration of drug indications from multiple health resources
Proceedings of the 1st ACM International Health Informatics Symposium
Using text to build semantic networks for pharmacogenomics
Journal of Biomedical Informatics
Mining comparative opinions from customer reviews for Competitive Intelligence
Decision Support Systems
Tree pattern expression for extracting information from syntactically parsed text corpora
Data Mining and Knowledge Discovery
Composition of semantic relations: model and applications
COLING '10 Proceedings of the 23rd International Conference on Computational Linguistics: Posters
A hybrid approach for the extraction of semantic relations from MEDLINE abstracts
CICLing'11 Proceedings of the 12th international conference on Computational linguistics and intelligent text processing - Volume Part II
Ontology learning from biomedical natural language documents using UMLS
Expert Systems with Applications: An International Journal
Medical entity recognition: a comparison of semantic and statistical methods
BioNLP '11 Proceedings of BioNLP 2011 Workshop
Towards an automated analysis of biomedical abstracts
DILS'06 Proceedings of the Third international conference on Data Integration in the Life Sciences
Learning information extraction rules for protein annotation from unannotated corpora
CICLing'05 Proceedings of the 6th international conference on Computational Linguistics and Intelligent Text Processing
Mining inter-entity semantic relations using improved transductive learning
IJCNLP'05 Proceedings of the Second international joint conference on Natural Language Processing
Semantics-aware open information extraction in the biomedical domain
Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences
Extraction of genic interactions with the recursive logical theory of an ontology
CICLing'10 Proceedings of the 11th international conference on Computational Linguistics and Intelligent Text Processing
Extracting information networks from the blogosphere
ACM Transactions on the Web (TWEB)
Journal of Biomedical Informatics
The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships
Journal of Biomedical Informatics
UTD: determining relational similarity using lexical patterns
SemEval '12 Proceedings of the First Joint Conference on Lexical and Computational Semantics - Volume 1: Proceedings of the main conference and the shared task, and Volume 2: Proceedings of the Sixth International Workshop on Semantic Evaluation
Social event radar: a bilingual context mining and sentiment analysis summarization system
ACL '12 Proceedings of the ACL 2012 System Demonstrations
BioOntoVerb: A top level ontology based framework to populate biomedical ontologies from texts
Knowledge-Based Systems
Corpus construction for extracting disease-gene relations
ISMIS'12 Proceedings of the 20th international conference on Foundations of Intelligent Systems
Methodological Review: Biomedical text mining and its applications in cancer research
Journal of Biomedical Informatics
Composition of semantic relations: Theoretical framework and case study
ACM Transactions on Speech and Language Processing (TSLP)
The DDI corpus: An annotated corpus with pharmacological substances and drug-drug interactions
Journal of Biomedical Informatics
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A crucial step toward the goal of automatic extraction of propositional information from natural language text is the identification of semantic relations between constituents in sentences. We examine the problem of distinguishing among seven relation types that can occur between the entities "treatment" and "disease" in bioscience text, and the problem of identifying such entities. We compare five generative graphical models and a neural network, using lexical, syntactic, and semantic features, finding that the latter help achieve high classification accuracy.