NiagaraCQ: a scalable continuous query system for Internet databases
SIGMOD '00 Proceedings of the 2000 ACM SIGMOD international conference on Management of data
VLAM-G: a grid-based virtual laboratory
Future Generation Computer Systems - Special section: Selected papers from the TERENA networking conference 2002
GridFlow: Workflow Management for Grid Computing
CCGRID '03 Proceedings of the 3st International Symposium on Cluster Computing and the Grid
GridWorkflow: A Flexible Failure Handling Framework for the Grid
HPDC '03 Proceedings of the 12th IEEE International Symposium on High Performance Distributed Computing
Triana: A Graphical Web Service Composition and Execution Toolkit
ICWS '04 Proceedings of the IEEE International Conference on Web Services
Advances in dataflow programming languages
ACM Computing Surveys (CSUR)
Processing XML streams with deterministic automata and stream indexes
ACM Transactions on Database Systems (TODS)
Fault-tolerance in the Borealis distributed stream processing system
Proceedings of the 2005 ACM SIGMOD international conference on Management of data
A survey of data provenance in e-science
ACM SIGMOD Record
A taxonomy of scientific workflow systems for grid computing
ACM SIGMOD Record
An Efficient XPath Query Processor for XML Streams
ICDE '06 Proceedings of the 22nd International Conference on Data Engineering
Enabling ScientificWorkflow Reuse through Structured Composition of Dataflow and Control-Flow
ICDEW '06 Proceedings of the 22nd International Conference on Data Engineering Workshops
Taverna: lessons in creating a workflow environment for the life sciences: Research Articles
Concurrency and Computation: Practice & Experience - Workflow in Grid Systems
Scientific workflow management and the Kepler system: Research Articles
Concurrency and Computation: Practice & Experience - Workflow in Grid Systems
Recycling workflows and services through discovery and reuse: Research Articles
Concurrency and Computation: Practice & Experience - Selected Papers from the 2004 U.K. e-Science All Hands Meeting (AHM 2004)
K-WfGrid Distributed Monitoring and Performance Analysis Services for Workflows in the Grid
E-SCIENCE '06 Proceedings of the Second IEEE International Conference on e-Science and Grid Computing
Workflow-Driven Ontologies: An Earth Sciences Case Study
E-SCIENCE '06 Proceedings of the Second IEEE International Conference on e-Science and Grid Computing
Pegasus: A framework for mapping complex scientific workflows onto distributed systems
Scientific Programming
An Efficient and Reliable Scientific Workflow System
CCGRID '07 Proceedings of the Seventh IEEE International Symposium on Cluster Computing and the Grid
ASKALON: A Grid Application Development and Computing Environment
GRID '05 Proceedings of the 6th IEEE/ACM International Workshop on Grid Computing
VLDB '04 Proceedings of the Thirtieth international conference on Very large data bases - Volume 30
Designing the myExperiment Virtual Research Environment for the Social Sharing of Workflows
E-SCIENCE '07 Proceedings of the Third IEEE International Conference on e-Science and Grid Computing
Provenance in collection-oriented scientific workflows
Concurrency and Computation: Practice & Experience - The First Provenance Challenge
Modeling and optimization of scientific workflows
Ph.D. '08 Proceedings of the 2008 EDBT Ph.D. workshop
IAAI'07 Proceedings of the 19th national conference on Innovative applications of artificial intelligence - Volume 2
Collection-Oriented scientific workflows for integrating and analyzing biological data
DILS'06 Proceedings of the Third international conference on Data Integration in the Life Sciences
A protocol for recording provenance in service-oriented grids
OPODIS'04 Proceedings of the 8th international conference on Principles of Distributed Systems
Workflow data patterns: identification, representation and tool support
ER'05 Proceedings of the 24th international conference on Conceptual Modeling
Provenance collection support in the kepler scientific workflow system
IPAW'06 Proceedings of the 2006 international conference on Provenance and Annotation of Data
Applying the virtual data provenance model
IPAW'06 Proceedings of the 2006 international conference on Provenance and Annotation of Data
A framework for comparing models of computation
IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems
Kepler/pPOD: Scientific Workflow and Provenance Support for Assembling the Tree of Life
Provenance and Annotation of Data and Processes
The data playground: An intuitive workflow specification environment
Future Generation Computer Systems
Editorial: Special section on workflow systems and applications in e-Science
Future Generation Computer Systems
Efficient provenance storage over nested data collections
Proceedings of the 12th International Conference on Extending Database Technology: Advances in Database Technology
Exploring Scientific Workflow Provenance Using Hybrid Queries over Nested Data and Lineage Graphs
SSDBM 2009 Proceedings of the 21st International Conference on Scientific and Statistical Database Management
Data Staging Strategies and Their Impact on the Execution of Scientific Workflows
Proceedings of the second international workshop on Data-aware distributed computing
DILS '09 Proceedings of the 6th International Workshop on Data Integration in the Life Sciences
An Integration and Analysis Pipeline for Systems Biology in Crop Plant Metabolism
DILS '09 Proceedings of the 6th International Workshop on Data Integration in the Life Sciences
Scientific Workflows: Business as Usual?
BPM '09 Proceedings of the 7th International Conference on Business Process Management
Future Generation Computer Systems
A navigation model for exploring scientific workflow provenance graphs
Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science
Scheduling data-intensive workflows on storage constrained resources
Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science
Scientific workflow design with data assembly lines
Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science
A multiple-perspective approach to constructing and aggregating Citation Semantic Link Network
Future Generation Computer Systems
DS-RT '09 Proceedings of the 2009 13th IEEE/ACM International Symposium on Distributed Simulation and Real Time Applications
Fine-grained and efficient lineage querying of collection-based workflow provenance
Proceedings of the 13th International Conference on Extending Database Technology
Parallelizing XML data-streaming workflows via MapReduce
Journal of Computer and System Sciences
A formal semantics for the Taverna 2 workflow model
Journal of Computer and System Sciences
Extending the SOA paradigm to e-Science environments
Future Generation Computer Systems
e-BioFlow: improving practical use of workflow systems in bioinformatics
ITBAM'10 Proceedings of the First international conference on Information technology in bio- and medical informatics
Efficient graph partitioning algorithms for collaborative grid workflow developer environments
EuroPar'10 Proceedings of the 16th international Euro-Par conference on Parallel processing: Part I
Managing variability in workflow with feature model composition operators
SC'10 Proceedings of the 9th international conference on Software composition
Future Generation Computer Systems
Scientific workflow reuse through conceptual workflows on the virtual imaging platform
Proceedings of the 6th workshop on Workflows in support of large-scale science
Proceedings of the 5th India Software Engineering Conference
A study on modeling of lightweight scientific workflow systems using XML schema
APWeb'12 Proceedings of the 14th Asia-Pacific international conference on Web Technologies and Applications
Composing multiple variability artifacts to assemble coherent workflows
Software Quality Control
Design and implementation of GXP make - A workflow system based on make
Future Generation Computer Systems
IPAW'12 Proceedings of the 4th international conference on Provenance and Annotation of Data and Processes
A declarative approach to customize workflow provenance
Proceedings of the Joint EDBT/ICDT 2013 Workshops
An SOA-based model for the integrated provisioning of cloud and grid resources
Advances in Software Engineering
Computer-Assisted Scientific Workflow Design
Journal of Grid Computing
A graph distance based metric for data oriented workflow retrieval with variable time constraints
Expert Systems with Applications: An International Journal
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Recent years have seen a dramatic increase in research and development of scientific workflow systems. These systems promise to make scientists more productive by automating data-driven and compute-intensive analyses. Despite many early achievements, the long-term success of scientific workflow technology critically depends on making these systems useable by ''mere mortals'', i.e., scientists who have a very good idea of the analysis methods they wish to assemble, but who are neither software developers nor scripting-language experts. With these users in mind, we identify a set of desiderata for scientific workflow systems crucial for enabling scientists to model and design the workflows they wish to automate themselves. As a first step towards meeting these requirements, we also show how the collection-oriented modeling and design (comad) approach for scientific workflows, implemented within the Kepler system, can help provide these critical, design-oriented capabilities to scientists.