Stroma classification for neuroblastoma on graphics processors

Authors:
Antonio Ruiz;Olcay Sertel;Manuel Ujaldon;Umit Catalyurek;Joel Saltz;Metin N. Gurcan
Affiliations:
Computer Architecture Department, University of Malaga, Malaga, Spain.;Biomedical Informatics Department, Ohio State University, Columbus, Ohio, USA.;Computer Architecture Department, University of Malaga, Malaga, Spain.;Biomedical Informatics Department, Ohio State University, Columbus, Ohio, USA.;Biomedical Informatics Department, Ohio State University, Columbus, Ohio, USA.;Biomedical Informatics Department, Ohio State University, Columbus, Ohio, USA
Venue:
International Journal of Data Mining and Bioinformatics
Year:
2009

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Abstract

A clustering algorithm is introduced that combines the strengths of clustering and motif finding techniques. Clusters are identified based on unambiguously defined sequence sections as in motif finding algorithms. The definition of similarity within ...