Clustering by pattern similarity in large data sets
Proceedings of the 2002 ACM SIGMOD international conference on Management of data
Clustering validity checking methods: part II
ACM SIGMOD Record
Biclustering of Expression Data
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology
MaPle: A Fast Algorithm for Maximal Pattern-based Clustering
ICDM '03 Proceedings of the Third IEEE International Conference on Data Mining
Biclustering Algorithms for Biological Data Analysis: A Survey
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Model-based overlapping clustering
Proceedings of the eleventh ACM SIGKDD international conference on Knowledge discovery in data mining
MicroCluster: Efficient Deterministic Biclustering of Microarray Data
IEEE Intelligent Systems
Possibilistic approach for biclustering microarray data
Computers in Biology and Medicine
Gene expression network discovery: a pattern based biclustering approach
Proceedings of the 2011 International Conference on Communication, Computing & Security
Finding Correlated Biclusters from Gene Expression Data
IEEE Transactions on Knowledge and Data Engineering
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Biological processes are not independent of each other as genes participate in multiple different processes. Each gene should be assigned to multiple biclusters. In real life, more than one gene is responsible for a particular type of disease. The biclustering can associate clusters with gene arrangement patterns, preserving genomic information. Additionally, overlapping capability is desirable for the discovery of multiple conserved patterns within a single genome. In strict or crisp partition-based biclustering, each gene/condition belongs to exactly one functional module whereas, addressing some biological questions requires partitioning methods leading to non-exclusive functional modules. The proposed method involves a novel strategy to discover such non-exclusive pattern-based biclusters using fuzzy set approach. We have evaluated the performance of our proposed model with few existing ones and the result shows that this can be suitable for application to genomes with high genetic exchange and various conserved gene arrangements in gene regulatory networks.