Simulations of microreactors: the order of things

Authors:
Joseph Ibershoff;Jerzy W. Jaromczyk;Danny van Noort
Affiliations:
Department of Computer Science, University of Kentucky, Lexington, KY;Department of Computer Science, University of Kentucky, Lexington, KY;Biointelligence Lab., School of Computer Science and Engineering, Seoul National University, Seoul, Korea
Venue:
DNA'06 Proceedings of the 12th international conference on DNA Computing
Year:
2006

Citing 3
Cited 0

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Simulation and visualization for DNA computing in microreactors

ICNC'05 Proceedings of the First international conference on Advances in Natural Computation - Volume Part II

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Abstract

Simulations are needed to predict various parameters for chemical reactions and error propagation in microfluidic networks. This paper studies the impact of the order of microreactors implementing a fluidic network on the error in solutions for Boolean expressions. Additionally, we present a computer program that augments the software toolkit introduced in our previous work. The program is useful for simulating microfluidics; we present an example from DNA computing. It monitors the concentration of every molecule throughout the fluidic network and assists in predicting how the layout of the network contributes to the error in the DNA computation.