Mathematical physiology

Adding data process feedback to the nonlinear autoregressive model

Signal Processing

Neuromodulation of decision and response selection

Neural Networks - Computational models of neuromodulation

Enhanced Artificial Neurons for Network Applications

Proceedings of the 14th International conference on Industrial and engineering applications of artificial intelligence and expert systems: engineering of intelligent systems

Scale continuum approach in biomechanics: a simple simulation of a microstructural control of tissues' stiffness

Mathematics and Computers in Simulation - MODELLING 2001 - Second IMACS conference on mathematical modelling and computational methods in mechanics, physics, biomechanics and geodynamics

Anisotropy, propagation failure, and wave speedup in traveling waves of discretizations of a Nagumo PDE

Journal of Computational Physics

Ergodicity of spike trains: when does trial averaging make sense?

Neural Computation

Controllability Problems for Differential Gompertzian Dynamic Equations

Cybernetics and Systems Analysis

Pattern formation in enzyme inhibition and cooperativity with parallel cellular automata

Parallel Computing - Special issue: Parallel and nature-inspired computational paradigms and applications

On the Phase Reduction and Response Dynamics of Neural Oscillator Populations

Neural Computation

Mathematical models and software tools for the glucose-insulin regulatory system and diabetes: an overview

Applied Numerical Mathematics - The third international conference on the numerical solutions of volterra and delay equations, May 2004, Tempe, AZ

On the use of the resting potential and level set methods for identifying ischemic heart disease: An inverse problem

Journal of Computational Physics

A kinetic Monte Carlo simulation study of inositol 1,4,5-trisphosphate receptor (IP3R) calcium release channel

Computational Biology and Chemistry

Rival approaches to mathematical modelling in immunology

Journal of Computational and Applied Mathematics

Reduced model and simulation of myelinated axon using eigenfunction expansion and singular perturbation

Computers in Biology and Medicine

Fourth-order compact schemes with adaptive time step for monodomain reaction-diffusion equations

Journal of Computational and Applied Mathematics

On the accuracy of operator splitting for the monodomain model of electrophysiology

International Journal of Computer Mathematics - Splitting Methods for Differential Equations

On torus Burth bifurcations in the pulse-width system

Automation and Remote Control

Contour Integration and Synchronization in Neuronal Networks of the Visual Cortex

ICANN '08 Proceedings of the 18th international conference on Artificial Neural Networks, Part II

Cardiac Electrophysiology Model Adjustment Using the Fusion of MR and Optical Imaging

MICCAI '08 Proceedings of the 11th international conference on Medical Image Computing and Computer-Assisted Intervention - Part I

A Definition of Cellular Interface Problems

Membrane Computing

Pseudospectral method of solution of the Fitzhugh-Nagumo equation

Mathematics and Computers in Simulation

Numerical solution of calcium-mediated dendritic branch model

Journal of Computational and Applied Mathematics

Convergence of a finite volume scheme for the bidomain model of cardiac tissue

Applied Numerical Mathematics

Short Note: An immersed boundary method for restricted diffusion with permeable interfaces

Journal of Computational Physics

Algebraic multigrid preconditioners for the bidomain reaction--diffusion system

Applied Numerical Mathematics

Electrical coupling promotes fidelity of responses in the networks of model neurons

Neural Computation

Mathematical models and software tools for the glucose-insulin regulatory system and diabetes: an overview

Applied Numerical Mathematics

Approaching cardiac modeling challenges to computer science with CellML-based web tools

Future Generation Computer Systems

Nonreflecting boundary conditions for discrete waves

Journal of Computational Physics

Quantitative comparison of two cardiac electrophysiology models using personalisation to optical and MR data

ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro

Fractional calculus models of complex dynamics in biological tissues

Computers & Mathematics with Applications

Spatially adaptive stochastic numerical methods for intrinsic fluctuations in reaction-diffusion systems

Journal of Computational Physics

Reaction-diffusion network for geometric multiscale high speed image processing

Image and Vision Computing

Oscillation analysis of linearly coupled piecewise affine systems

Proceedings of the 13th ACM international conference on Hybrid systems: computation and control

An anisotropic multi-front fast marching method for real-time simulation of cardiac electrophysiology

FIMH'07 Proceedings of the 4th international conference on Functional imaging and modeling of the heart

Algebraic systems biology: theses and hypotheses

AB'07 Proceedings of the 2nd international conference on Algebraic biology

Algorithmic algebraic model checking IV: characterization of metabolic networks

AB'07 Proceedings of the 2nd international conference on Algebraic biology

A recursive anisotropic fast marching approach to reaction diffusion equation: application to tumor growth modeling

IPMI'07 Proceedings of the 20th international conference on Information processing in medical imaging

Adaptive Multiresolution Methods for the Simulation of Waves in Excitable Media

Journal of Scientific Computing

Towards an identification of tumor growth parameters from time series of images

MICCAI'07 Proceedings of the 10th international conference on Medical image computing and computer-assisted intervention - Volume Part I

The immersed boundary method for advection-electrodiffusion with implicit timestepping and local mesh refinement

Journal of Computational Physics

Three: dimensional bursting simulation on two parallel systems

ICCSA'07 Proceedings of the 2007 international conference on Computational science and its applications - Volume Part III

Graphical methods for analysing feedback in biological networks-A survey

International Journal of Systems Science - Dynamics Analysis of Gene Regulatory Networks

Generic conduction parameters for predicting activation waves in customised cardiac electrophysiology models

STACOM'10/CESC'10 Proceedings of the First international conference on Statistical atlases and computational models of the heart, and international conference on Cardiac electrophysiological simulation challenge

Estimation of reaction, diffusion and restitution parameters for a 3D myocardial model using optical mapping and MRI

STACOM'10/CESC'10 Proceedings of the First international conference on Statistical atlases and computational models of the heart, and international conference on Cardiac electrophysiological simulation challenge

Coupled personalisation of electrophysiology models for simulation of induced ischemic ventricular tachycardia

MICCAI'10 Proceedings of the 13th international conference on Medical image computing and computer-assisted intervention: Part II

A fuzzy approach for robust reference-tracking-control design of nonlinear distributed parameter time-delayed systems and its application

IEEE Transactions on Fuzzy Systems

Robust observer-based tracking control of hodgkin-huxley neuron systems under environmental disturbances

Neural Computation

Visual Computing in Biology and Medicine: A multi-front eikonal model of cardiac electrophysiology for interactive simulation of radio-frequency ablation

Computers and Graphics

Computer modeling of the neuronal activity described with the simplified Hodgkin-Huxley system of differential equations

ICCOMP'06 Proceedings of the 10th WSEAS international conference on Computers

Graphical simulation environments for modelling and simulation of integrative physiology

Computer Methods and Programs in Biomedicine

Robust stability and instability of biochemical networks with parametric uncertainty

Automatica (Journal of IFAC)

Brief paper: Oscillation analysis of linearly coupled piecewise affine systems: Application to spatio-temporal neuron dynamics

Automatica (Journal of IFAC)

A fast-marching approach to cardiac electrophysiology simulation for XMR interventional imaging

MICCAI'05 Proceedings of the 8th international conference on Medical image computing and computer-assisted intervention - Volume Part II

Spiking neurons and the first passage problem

Neural Computation

Estimation of activation times in cardiac tissue using graph based methods

FIMH'11 Proceedings of the 6th international conference on Functional imaging and modeling of the heart

Computing the stability of steady-state solutions of mathematical models of the electrical activity in the heart

Computers in Biology and Medicine

Error-controlled global sensitivity analysis of ordinary differential equations

Journal of Computational Physics

Non-invasive estimate of blood glucose and blood pressure from a photoplethysmograph by means of machine learning techniques

Artificial Intelligence in Medicine

From cardiac cells to genetic regulatory networks

CAV'11 Proceedings of the 23rd international conference on Computer aided verification

An efficient parallel stochastic simulation method for analysis of nonviral gene delivery systems

Proceedings of the 9th International Conference on Computational Methods in Systems Biology

Efficient Preconditioners for Optimality Systems Arising in Connection with Inverse Problems

SIAM Journal on Control and Optimization

Pulsating flow and platelet aggregation

ICCS'05 Proceedings of the 5th international conference on Computational Science - Volume Part III

Multi-formalism modelling of cardiac tissue

FIMH'05 Proceedings of the Third international conference on Functional Imaging and Modeling of the Heart

Stochastic modeling of cytoplasmic reactions in complex biological systems

ICCSA'06 Proceedings of the 6th international conference on Computational Science and Its Applications - Volume Part I

A transformation tool for ODE based models

ICCS'06 Proceedings of the 6th international conference on Computational Science - Volume Part I

Bifurcations in the Hodgkin-Huxley model exposed to DC electric fields

Neurocomputing

Algorithmic algebraic model checking i: challenges from systems biology

CAV'05 Proceedings of the 17th international conference on Computer Aided Verification

Efficient simulation of cardiac electrical propagation using high order finite elements

Journal of Computational Physics

Parallel simulation of three–dimensional bursting with MPI and OpenMP

ICCS'06 Proceedings of the 6th international conference on Computational Science - Volume Part II

EP challenge - STACOM'11: forward approaches to computational electrophysiology using MRI-Based models and in-vivo CARTO mapping in swine hearts

STACOM'11 Proceedings of the Second international conference on Statistical Atlases and Computational Models of the Heart: imaging and modelling challenges

Spatio-temporal concentration of acetylcholine in vertebrate synaptic cleft

Mathematical and Computer Modelling: An International Journal

Numerical approximation of solutions of a nonlinear inverse problem arising in olfaction experimentation

Mathematical and Computer Modelling: An International Journal

A Lattice Boltzmann Model for the Reaction-Diffusion Equations with Higher-Order Accuracy

Journal of Scientific Computing

Neural dynamics, bifurcations, and firing rates in a quadratic integrate-and-fire model with a recovery variable. i: Deterministic behavior

Neural Computation

Mixed-Mode Oscillations with Multiple Time Scales

SIAM Review

Interactive real time simulation of cardiac radio-frequency ablation

EG VCBM'10 Proceedings of the 2nd Eurographics conference on Visual Computing for Biology and Medicine

Bifurcation analysis of a two-dimensional simplified hodgkin-huxley model exposed to external electric fields

ICONIP'12 Proceedings of the 19th international conference on Neural Information Processing - Volume Part I

Minimum energy desynchronizing control for coupled neurons

Journal of Computational Neuroscience

Continuation-based numerical detection of after-depolarization and spike-adding thresholds

Neural Computation

In vivo contact EP data and ex vivo MR-based computer models: registration and model-dependent errors

STACOM'12 Proceedings of the third international conference on Statistical Atlases and Computational Models of the Heart: imaging and modelling challenges

Volume conductor models in surface electromyography: Computational techniques

Computers in Biology and Medicine

Chaste: A case study of parallelisation of an open source finite-element solver with applications to computational cardiac electrophysiology simulation

International Journal of High Performance Computing Applications