Fast text searching: allowing errors
Communications of the ACM
Suffix arrays: a new method for on-line string searches
SIAM Journal on Computing
Algorithms on strings, trees, and sequences: computer science and computational biology
Algorithms on strings, trees, and sequences: computer science and computational biology
Optimal multi-step k-nearest neighbor search
SIGMOD '98 Proceedings of the 1998 ACM SIGMOD international conference on Management of data
Approximate nearest neighbors and sequence comparison with block operations
STOC '00 Proceedings of the thirty-second annual ACM symposium on Theory of computing
An experimental study of an opportunistic index
SODA '01 Proceedings of the twelfth annual ACM-SIAM symposium on Discrete algorithms
Variable Length Queries for Time Series Data
Proceedings of the 17th International Conference on Data Engineering
Fast Nearest Neighbor Search in Medical Image Databases
VLDB '96 Proceedings of the 22th International Conference on Very Large Data Bases
Fast and Practical Approximate String Matching
CPM '92 Proceedings of the Third Annual Symposium on Combinatorial Pattern Matching
Searching in metric spaces with user-defined and approximate distances
ACM Transactions on Database Systems (TODS)
Vulnerabilities in similarity search based systems
Proceedings of the eleventh international conference on Information and knowledge management
Database indexing for large DNA and protein sequence collections
The VLDB Journal — The International Journal on Very Large Data Bases
String Matching with Metric Trees Using an Approximate Distance
SPIRE 2002 Proceedings of the 9th International Symposium on String Processing and Information Retrieval
Complex Data: Mining Using Patterns
Proceedings of the ESF Exploratory Workshop on Pattern Detection and Discovery
The building of BODHI, a bio-diversity database system
Information Systems - Special issue: Data management in bioinformatics
Genome on Demand: Interactive Substring Searching
CSB '03 Proceedings of the IEEE Computer Society Conference on Bioinformatics
Genomic Sequence Analysis Using Gap Sequences and Pattern Filtering
CSB '03 Proceedings of the IEEE Computer Society Conference on Bioinformatics
Optimizing Similarity Search for Arbitrary Length Time Series Queries
IEEE Transactions on Knowledge and Data Engineering
SPINE: Putting Backbone into String Indexing
ICDE '04 Proceedings of the 20th International Conference on Data Engineering
Incorporating Updates in Domain Indexes: Experiences with Oracle Spatial R-trees
ICDE '04 Proceedings of the 20th International Conference on Data Engineering
Proceedings of the 27th annual international ACM SIGIR conference on Research and development in information retrieval
Automatic Feature Extraction for Classifying Audio Data
Machine Learning
GECCO '05 Proceedings of the 7th annual workshop on Genetic and evolutionary computation
An efficient approach for sequence matching in large DNA databases
Journal of Information Science
An efficient DNA sequence searching method using position specific weighting scheme
Journal of Information Science
Reference-based indexing of sequence databases
VLDB '06 Proceedings of the 32nd international conference on Very large data bases
Survey on index based homology search algorithms
The Journal of Supercomputing
The privacy of k-NN retrieval for horizontal partitioned data: new methods and applications
ADC '07 Proceedings of the eighteenth conference on Australasian database - Volume 63
Searching on the secondary structure of protein sequences
VLDB '02 Proceedings of the 28th international conference on Very Large Data Bases
Indexing schemes for similarity search in datasets of short protein fragments
Information Systems
OASIS: an online and accurate technique for local-alignment searches on biological sequences
VLDB '03 Proceedings of the 29th international conference on Very large data bases - Volume 29
Reference-based indexing for metric spaces with costly distance measures
The VLDB Journal — The International Journal on Very Large Data Bases
Efficient Similarity Search for Tree-Structured Data
SSDBM '08 Proceedings of the 20th international conference on Scientific and Statistical Database Management
A comprehensive trainable error model for sung music queries
Journal of Artificial Intelligence Research
A practical method for approximate subsequence search in DNA databases
PAKDD'07 Proceedings of the 11th Pacific-Asia conference on Advances in knowledge discovery and data mining
Exhaustive peptide searching using relations
BNCOD'07 Proceedings of the 24th British national conference on Databases
Brief communication: An efficient similarity search based on indexing in large DNA databases
Computational Biology and Chemistry
Indexing methods for approximate dictionary searching: Comparative analysis
Journal of Experimental Algorithmics (JEA)
Efficient exact edit similarity query processing with the asymmetric signature scheme
Proceedings of the 2011 ACM SIGMOD International Conference on Management of data
Efficiently querying protein sequences with the proteinus index
BSB'11 Proceedings of the 6th Brazilian conference on Advances in bioinformatics and computational biology
An improved sequential clustering algorithm
AICI'11 Proceedings of the Third international conference on Artificial intelligence and computational intelligence - Volume Part I
Filtering bio-sequence based on sequence descriptor
BioDM'06 Proceedings of the 2006 international conference on Data Mining for Biomedical Applications
A new method for finding approximate repetitions in DNA sequences
WAIM '06 Proceedings of the 7th international conference on Advances in Web-Age Information Management
A DNA index structure using frequency and position information of genetic alphabet
PAKDD'05 Proceedings of the 9th Pacific-Asia conference on Advances in Knowledge Discovery and Data Mining
Indexing DNA sequences using q-grams
DASFAA'05 Proceedings of the 10th international conference on Database Systems for Advanced Applications
Rise and fall patterns of information diffusion: model and implications
Proceedings of the 18th ACM SIGKDD international conference on Knowledge discovery and data mining
Efficient range queries over uncertain strings
SSDBM'12 Proceedings of the 24th international conference on Scientific and Statistical Database Management
A query based approach for mining evolving graphs
AusDM '09 Proceedings of the Eighth Australasian Data Mining Conference - Volume 101
Approximate string matching by position restricted alignment
Proceedings of the Joint EDBT/ICDT 2013 Workshops
Trie-based similarity search and join
Proceedings of the Joint EDBT/ICDT 2013 Workshops
Efficient fuzzy search in large text collections
ACM Transactions on Information Systems (TOIS)
Asymmetric signature schemes for efficient exact edit similarity query processing
ACM Transactions on Database Systems (TODS)
Stochastically Balancing Trees for File and Database Systems
International Journal of Green Computing
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