One class SVM for yeast regulation prediction

  • Authors:
  • Adam Kowalczyk;Bhavani Raskutti

  • Affiliations:
  • Telstra Research Laboratories, 770 Blackburn Clayton, Victoria, Australia;Telstra Research Laboratories, 770 Blackburn Clayton, Victoria, Australia

  • Venue:
  • ACM SIGKDD Explorations Newsletter
  • Year:
  • 2002

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Abstract

In this paper, we outline the main steps leading to the development of the winning solution for Task 2 of KDD Cup 2002 (Yeast Gene Regulation Prediction). Our unusual solution was a pair of linear classifiers in high dimensional space (∼14,000), developed with just 38 and 84 training examples, respectively, all belonging to the target class only. The classifiers were built using the support vector machine approach outlined in the paper.