Adaptation in natural and artificial systems
Adaptation in natural and artificial systems
Genetic Algorithms in Search, Optimization and Machine Learning
Genetic Algorithms in Search, Optimization and Machine Learning
Schemata, Distributions and Graphical Models in Evolutionary Optimization
Journal of Heuristics
From Recombination of Genes to the Estimation of Distributions I. Binary Parameters
PPSN IV Proceedings of the 4th International Conference on Parallel Problem Solving from Nature
Population-Based Incremental Learning: A Method for Integrating Genetic Search Based Function Optimization and Competitive Learning
International Journal of Uncertainty, Fuzziness and Knowledge-Based Systems - New trends in probabilistic graphical models
The Estimation of Distributions and the Minimum Relative Entropy Principle
Evolutionary Computation
IEEE Transactions on Evolutionary Computation
Adding Probabilistic Dependencies to the Search of Protein Side Chain Configurations Using EDAs
Proceedings of the 10th international conference on Parallel Problem Solving from Nature: PPSN X
EvoBIO'07 Proceedings of the 5th European conference on Evolutionary computation, machine learning and data mining in bioinformatics
Δ-Entropy: Definition, properties and applications in system identification with quantized data
Information Sciences: an International Journal
Information Sciences: an International Journal
The discretizable molecular distance geometry problem
Computational Optimization and Applications
Regularized continuous estimation of distribution algorithms
Applied Soft Computing
Hi-index | 0.00 |
Objective: This paper presents an algorithm for the solution of the side chain placement problem. Methods and materials: The algorithm combines the application of the Goldstein elimination criterion with the univariate marginal distribution algorithm (UMDA), which stochastically searches the space of possible solutions. The suitability of the algorithm to address the problem is investigated using a set of 425 proteins. Results: For a number of difficult instances where inference algorithms do not converge, it has been shown that UMDA is able to find better structures. Conclusions: The results obtained show that the algorithm can achieve better structures than those obtained with other state-of-the-art methods like inference-based techniques. Additionally, a theoretical and empirical analysis of the computational cost of the algorithm introduced has been presented.