Vertex cover: further observations and further improvements
Journal of Algorithms
Complexity and Approximation: Combinatorial Optimization Problems and Their Approximability Properties
Haplotype reconstruction from SNP alignment
RECOMB '03 Proceedings of the seventh annual international conference on Research in computational molecular biology
A Practical Algorithm for Optimal Inference of Haplotypes from Diploid Populations
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology
WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
Haplotype inference by pure Parsimony
CPM'03 Proceedings of the 14th annual conference on Combinatorial pattern matching
An approximation algorithm for haplotype inference by maximum parsimony
Proceedings of the 2005 ACM symposium on Applied computing
Islands of Tractability for Parsimony Haplotyping
CSB '05 Proceedings of the 2005 IEEE Computational Systems Bioinformatics Conference
Integer Programming Approaches to Haplotype Inference by Pure Parsimony
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Islands of Tractability for Parsimony Haplotyping
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Solving haplotyping inference parsimony problem using a new basic polynomial formulation
Computers & Mathematics with Applications
The phasing of heterozygous traits: Algorithms and complexity
Computers & Mathematics with Applications
Boosting Haplotype Inference with Local Search
Constraints
Haplotyping for Disease Association: A Combinatorial Approach
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Highly Scalable Genotype Phasing by Entropy Minimization
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Computational Complexity of Perfect-Phylogeny-Related Haplotyping Problems
MFCS '08 Proceedings of the 33rd international symposium on Mathematical Foundations of Computer Science
Two-Level ACO for Haplotype Inference Under Pure Parsimony
ANTS '08 Proceedings of the 6th international conference on Ant Colony Optimization and Swarm Intelligence
A Set-Covering Approach with Column Generation for Parsimony Haplotyping
INFORMS Journal on Computing
Pure Parsimony Xor Haplotyping
ISBRA '09 Proceedings of the 5th International Symposium on Bioinformatics Research and Applications
A Decomposition of the Pure Parsimony Haplotyping Problem
ISBRA '09 Proceedings of the 5th International Symposium on Bioinformatics Research and Applications
On the Approximability of Some Haplotyping Problems
AAIM '09 Proceedings of the 5th International Conference on Algorithmic Aspects in Information and Management
Haplotype Inference Constrained by Plausible Haplotype Data
CPM '09 Proceedings of the 20th Annual Symposium on Combinatorial Pattern Matching
Efficient haplotype inference with boolean satisfiability
AAAI'06 Proceedings of the 21st national conference on Artificial intelligence - Volume 1
HAPLO-ASP: Haplotype Inference Using Answer Set Programming
LPNMR '09 Proceedings of the 10th International Conference on Logic Programming and Nonmonotonic Reasoning
Efficient haplotype inference with answer set programming
AAAI'08 Proceedings of the 23rd national conference on Artificial intelligence - Volume 1
Efficient haplotype inference with answer set programming
AAAI'08 Proceedings of the 23rd national conference on Artificial intelligence - Volume 3
Efficient haplotype inference with pseudo-boolean optimization
AB'07 Proceedings of the 2nd international conference on Algebraic biology
EPIA'07 Proceedings of the aritficial intelligence 13th Portuguese conference on Progress in artificial intelligence
Efficient haplotype inference with combined CP and OR techniques
CPAIOR'08 Proceedings of the 5th international conference on Integration of AI and OR techniques in constraint programming for combinatorial optimization problems
A Class Representative Model for Pure Parsimony Haplotyping
INFORMS Journal on Computing
CollHaps: A Heuristic Approach to Haplotype Inference by Parsimony
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Phylogeny - and parsimony-based haplotype inference with constraints
CPM'10 Proceedings of the 21st annual conference on Combinatorial pattern matching
Extended islands of tractability for parsimony haplotyping
CPM'10 Proceedings of the 21st annual conference on Combinatorial pattern matching
Insights on haplotype inference on large genotype datasets
BSB'10 Proceedings of the Advances in bioinformatics and computational biology, and 5th Brazilian conference on Bioinformatics
Pure Parsimony Xor Haplotyping
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Improved approximation bounds for the minimum rainbow subgraph problem
Information Processing Letters
Haplotype Inference Constrained by Plausible Haplotype Data
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
WABI'06 Proceedings of the 6th international conference on Algorithms in Bioinformatics
On the complexity of several haplotyping problems
WABI'05 Proceedings of the 5th International conference on Algorithms in Bioinformatics
Phylogeny- and parsimony-based haplotype inference with constraints
Information and Computation
SAT in bioinformatics: making the case with haplotype inference
SAT'06 Proceedings of the 9th international conference on Theory and Applications of Satisfiability Testing
ICCS'06 Proceedings of the 6th international conference on Computational Science - Volume Part II
A faster haplotyping algorithm based on block partition, and greedy ligation strategy
ICIC'11 Proceedings of the 7th international conference on Intelligent Computing: bio-inspired computing and applications
Efficient and accurate haplotype inference by combining parsimony and pedigree information
ANB'10 Proceedings of the 4th international conference on Algebraic and Numeric Biology
Using genetic algorithm in reconstructing single individual haplotype with minimum error correction
Journal of Biomedical Informatics
COCOON'07 Proceedings of the 13th annual international conference on Computing and Combinatorics
Minimum mosaic inference of a set of recombinants
CATS '11 Proceedings of the Seventeenth Computing: The Australasian Theory Symposium - Volume 119
Minimum mosaic inference of a set of recombinants
CATS 2011 Proceedings of the Seventeenth Computing on The Australasian Theory Symposium - Volume 119
FNphasing: A Novel Fast Heuristic Algorithm for Haplotype Phasing Based on Flow Network Model
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
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With the identification of a novel coronavirus associated with the severe acute respiratory syndrome (SARS), computational analysis of its RNA genome sequence is expected to give useful clues to help elucidate the origin, evolution, and pathogenicity ...