Algorithms for clustering data
Algorithms for clustering data
Evolutionary algorithms in theory and practice: evolution strategies, evolutionary programming, genetic algorithms
Genetic algorithms + data structures = evolution programs (3rd ed.)
Genetic algorithms + data structures = evolution programs (3rd ed.)
Neural fuzzy systems: a neuro-fuzzy synergism to intelligent systems
Neural fuzzy systems: a neuro-fuzzy synergism to intelligent systems
Swarm intelligence
Bioinformatics: the machine learning approach
Bioinformatics: the machine learning approach
Self-organizing maps in mining gene expression data
Information Sciences: an International Journal
Neural Networks: A Comprehensive Foundation
Neural Networks: A Comprehensive Foundation
Pattern Recognition with Fuzzy Objective Function Algorithms
Pattern Recognition with Fuzzy Objective Function Algorithms
Inference of a gene regulatory network by means of interactive evolutionary computing
Information Sciences—Informatics and Computer Science: An International Journal - Bioinformatics-selected papers from 4th CBGI & 6th JCIS Proceedings
Immunity-Based Systems
Discovering Gene Networks with a Neural-Genetic Hybrid
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
2005 Special Issue: Learning protein secondary structure from sequential and relational data
Neural Networks - Special issue on neural networks and kernel methods for structured domains
Pattern Recognition and Machine Learning (Information Science and Statistics)
Pattern Recognition and Machine Learning (Information Science and Statistics)
Introduction to Machine Learning and Bioinformatics
Introduction to Machine Learning and Bioinformatics
Multi-objective evolutionary biclustering of gene expression data
Pattern Recognition
Gene interaction - An evolutionary biclustering approach
Information Fusion
A fuzzy sets based generalization of contact maps for the overlap of protein structures
Fuzzy Sets and Systems
A fast and elitist multiobjective genetic algorithm: NSGA-II
IEEE Transactions on Evolutionary Computation
Evolving connectionist systems for knowledge discovery from gene expression data of cancer tissue
Artificial Intelligence in Medicine
A boosting approach to multiview classification with cooperation
ECML PKDD'11 Proceedings of the 2011 European conference on Machine learning and knowledge discovery in databases - Volume Part II
Thematic fuzzy clusters with an additive spectral approach
EPIA'11 Proceedings of the 15th Portugese conference on Progress in artificial intelligence
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Often data analysis problems in Bioinformatics concern the fusion of multisensor outputs or the fusion of multisource information, where one must integrate different kinds of biological data. Natural computing provides several possibilities in Bioinformatics, especially by presenting interesting nature-inspired methodologies for handling such complex problems. In this article we survey the role of natural computing in the domains of protein structure prediction, microarray data analysis and gene regulatory network generation. We utilize the learning ability of neural networks for adapting, uncertainty handling capacity of fuzzy sets and rough sets for modeling ambiguity, and the search potential of genetic algorithms for efficiently traversing large search spaces.