Visualisation of influenza A protein segments in distance invariant self-organising map

Authors:
Wei-Chen Cheng;Cheng-Yuan Liou
Affiliations:
Department of Computer Science and Information Engineering, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei 10617, Taiwan.;Department of Computer Science and Information Engineering, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei 10617, Taiwan
Venue:
International Journal of Intelligent Information and Database Systems
Year:
2012

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Abstract

Due to the lateral gene transfer, the phylogenetic tree could be inadequate for representing the evolution of virus. This paper employs the distance invariant manifold (Cheng and Liou, 2009) to display the collection of influenza A in a cubic space. This space provides a global view of the evolution of the whole family vividly.