The String-to-String Correction Problem
Journal of the ACM (JACM)
Selected combinatorial research problems.
Selected combinatorial research problems.
ACM Transactions on Programming Languages and Systems (TOPLAS)
Parallel parsing on a one-way array of finite-state machines
IEEE Transactions on Computers
New algorithms for comparing symbol sequences
ACM '87 Proceedings of the 1987 Fall Joint Computer Conference on Exploring technology: today and tomorrow
Row replacement algorithms for screen editors
ACM Transactions on Programming Languages and Systems (TOPLAS)
A fast algorithm for optimal length-limited Huffman codes
Journal of the ACM (JACM)
Optimal Correspondence of String Subsequences
IEEE Transactions on Pattern Analysis and Machine Intelligence
Space optimization in the bottom-up evaluation of logic programs
SIGMOD '91 Proceedings of the 1991 ACM SIGMOD international conference on Management of data
String Editing on a One-Way Linear Array of Finite-State Machines
IEEE Transactions on Computers
Hybrid pattern recognition system capable of self-modification
CIKM '93 Proceedings of the second international conference on Information and knowledge management
Selecting tests and identifying test coverage requirements for modified software
ISSTA '94 Proceedings of the 1994 ACM SIGSOFT international symposium on Software testing and analysis
How to forget the past without repeating it
Journal of the ACM (JACM)
Space optimization in deductive databases
ACM Transactions on Database Systems (TODS)
The Normalized String Editing Problem Revisited
IEEE Transactions on Pattern Analysis and Machine Intelligence
Numerical Similarity and Dissimilarity Measures Between Two Trees
IEEE Transactions on Computers
Sequence alignment with tandem duplication
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Las Vegas algorithms for gene recognition: suboptimal and error-tolerant spliced alignment
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Aligning a DNA sequence with a protein sequence
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Implementation of Genetic Sequence Alignment Programs on Supercomputers
The Journal of Supercomputing - Special issue on supercomputing in medicine
Kestrel: A Programmable Array for Sequence Analysis
Journal of VLSI Signal Processing Systems - Special issue on application specific systems, architectures and processors
Sim: a utility for detecting similarity in computer programs
SIGCSE '99 The proceedings of the thirtieth SIGCSE technical symposium on Computer science education
Reconstructing a history of recombinations from a set of sequences
SODA '94 Proceedings of the fifth annual ACM-SIAM symposium on Discrete algorithms
Proceedings of the tenth annual ACM-SIAM symposium on Discrete algorithms
SODA '90 Proceedings of the first annual ACM-SIAM symposium on Discrete algorithms
Bounds on the Complexity of the Longest Common Subsequence Problem
Journal of the ACM (JACM)
Algorithms for the Longest Common Subsequence Problem
Journal of the ACM (JACM)
The Complexity of Some Problems on Subsequences and Supersequences
Journal of the ACM (JACM)
The Tree-to-Tree Correction Problem
Journal of the ACM (JACM)
On the shared substring alignment problem
SODA '00 Proceedings of the eleventh annual ACM-SIAM symposium on Discrete algorithms
Tabulation Techniques for Recursive Programs
ACM Computing Surveys (CSUR)
The string-to-string correction problem with block moves
ACM Transactions on Computer Systems (TOCS)
A technique for isolating differences between files
Communications of the ACM
A fast algorithm for computing longest common subsequences
Communications of the ACM
Extracting usability information from user interface events
ACM Computing Surveys (CSUR)
An Efficient Systolic Algorithm for the Longest CommonSubsequence Problem
The Journal of Supercomputing
Parallel Computation in Biological Sequence Analysis
IEEE Transactions on Parallel and Distributed Systems
Haplotypes and informative SNP selection algorithms: don't block out information
RECOMB '03 Proceedings of the seventh annual international conference on Research in computational molecular biology
A new flexible algorithm for the longest common subsequence problem
Nordic Journal of Computing
Approximate string matching with gaps
Nordic Journal of Computing
HiPC '02 Proceedings of the 9th International Conference on High Performance Computing
How to Forget the Past Without Repeating It
VLDB '90 Proceedings of the 16th International Conference on Very Large Data Bases
Efficient Computation of All Longest Common Subsequences
SWAT '00 Proceedings of the 7th Scandinavian Workshop on Algorithm Theory
Comparative Methods for Gene Structure Prediction in Homologous Sequences
WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
Cluster: A Fast Tool to Identify Groups of Similar Programs
COCOON '02 Proceedings of the 8th Annual International Conference on Computing and Combinatorics
WIA '98 Revised Papers from the Third International Workshop on Automata Implementation
Practical Software for Aligning ESTs to Human Genome
CPM '02 Proceedings of the 13th Annual Symposium on Combinatorial Pattern Matching
GESTALT: Genomic Steiner Alignments
CPM '99 Proceedings of the 10th Annual Symposium on Combinatorial Pattern Matching
Finding an Optimal Path without Growing the Tree
ESA '98 Proceedings of the 6th Annual European Symposium on Algorithms
Memory-efficient A* heuristics for multiple sequence alignment
Eighteenth national conference on Artificial intelligence
Orphan gene finding: an exon assembly approach
Theoretical Computer Science
Fast and Sensitive Algorithm for Aligning ESTs to Human Genome
CSB '02 Proceedings of the IEEE Computer Society Conference on Bioinformatics
Fast and Sensitive Alignment of Large Genomic Sequences
CSB '02 Proceedings of the IEEE Computer Society Conference on Bioinformatics
POPL '84 Proceedings of the 11th ACM SIGACT-SIGPLAN symposium on Principles of programming languages
Proceedings of the ACM SIGPLAN SIGOA symposium on Text manipulation
MAP: A tool for understanding software
ICSE '82 Proceedings of the 6th international conference on Software engineering
Parallel biological sequence comparison using prefix computations
Journal of Parallel and Distributed Computing
Route planning and map inference with global positioning traces
Computer Science in Perspective
A New Approach for Gene Annotation Using Unambiguous Sequence Joining
CSB '03 Proceedings of the IEEE Computer Society Conference on Bioinformatics
Speeding-up Hirschberg and Hunt-Szymanski LCS algorithms
Fundamenta Informaticae - Special issue on computing patterns in strings
Finding an optimal path without growing the tree
Journal of Algorithms
RECOMB '04 Proceedings of the eighth annual international conference on Resaerch in computational molecular biology
A learning algorithm for the longest common subsequence problem
Journal of Experimental Algorithmics (JEA)
Space-Conserving Optimal DNA-Protein Alignment
CSB '04 Proceedings of the 2004 IEEE Computational Systems Bioinformatics Conference
Space and Time Optimal Parallel Sequence Alignments
IEEE Transactions on Parallel and Distributed Systems
The UCSC Kestrel Parallel Processor
IEEE Transactions on Parallel and Distributed Systems
New Processor Array Architectures for the Longest Common Subsequence Problem
The Journal of Supercomputing
Space-efficient construction variants of dynamic programming
Nordic Journal of Computing
An almost-linear time and linear space algorithm for the longest common subsequence problem
Information Processing Letters
The intractability of computing the Hamming distance
Theoretical Computer Science
An adaptive grid implementation of DNA sequence alignment
Future Generation Computer Systems
Journal of the ACM (JACM)
Cache-oblivious dynamic programming
SODA '06 Proceedings of the seventeenth annual ACM-SIAM symposium on Discrete algorithm
Breadth-first heuristic search
Artificial Intelligence
Looking for monotonicity properties of a similarity constraint on sequences
Proceedings of the 2006 ACM symposium on Applied computing
Pairwise sequence comparison for fitness evaluation in evolutionary structural software testing
Proceedings of the 8th annual conference on Genetic and evolutionary computation
A linear space algorithm for computing a longest common increasing subsequence
Information Processing Letters
Multi-column substring matching for database schema translation
VLDB '06 Proceedings of the 32nd international conference on Very large data bases
Comparing and managing multiple versions of slide presentations
UIST '06 Proceedings of the 19th annual ACM symposium on User interface software and technology
Data streams: algorithms and applications
Foundations and Trends® in Theoretical Computer Science
Table design in dynamic programming
Information and Computation
Dynamic programming algorithms for the mosaic longest common subsequence problem
Information Processing Letters
Efficient algorithms for regular expression constrained sequence alignment
Information Processing Letters
Efficient algorithms for finding interleaving relationship between sequences
Information Processing Letters
A parallel strategy for biological sequence alignment in restricted memory space
Journal of Parallel and Distributed Computing
An all-substrings common subsequence algorithm
Discrete Applied Mathematics
Comparing bacterial genomes from linear orders of patterns
Discrete Applied Mathematics
A parallel LCS algorithm for biosequences alignment
Proceedings of the 2nd international conference on Scalable information systems
Cache-efficient dynamic programming algorithms for multicores
Proceedings of the twentieth annual symposium on Parallelism in algorithms and architectures
Approximate labelled subtree homeomorphism
Journal of Discrete Algorithms
Real-Time Model Checking on Secondary Storage
Model Checking and Artificial Intelligence
Externalizing the Multiple Sequence Alignment Problem with Affine Gap Costs
KI '07 Proceedings of the 30th annual German conference on Advances in Artificial Intelligence
Fast Algorithms for Computing Tree LCS
CPM '08 Proceedings of the 19th annual symposium on Combinatorial Pattern Matching
Constrained LCS: Hardness and Approximation
CPM '08 Proceedings of the 19th annual symposium on Combinatorial Pattern Matching
Sequence Alignment Algorithms for Run-Length-Encoded Strings
COCOON '08 Proceedings of the 14th annual international conference on Computing and Combinatorics
Extending the Four Russian Algorithm to Compute the Edit Script in Linear Space
ICCS '08 Proceedings of the 8th international conference on Computational Science, Part I
The VLDB Journal — The International Journal on Very Large Data Bases
Combining content extraction heuristics: the CombinE system
Proceedings of the 10th International Conference on Information Integration and Web-based Applications & Services
Critical Edition of Sanskrit Texts
Sanskrit Computational Linguistics
A space-efficient algorithm for three sequence alignment and ancestor inference
International Journal of Data Mining and Bioinformatics
Semantics-aware trace analysis
Proceedings of the 2009 ACM SIGPLAN conference on Programming language design and implementation
Pairwise sequence alignment algorithms: a survey
Proceedings of the 2009 conference on Information Science, Technology and Applications
Introducing Softness into Inductive Queries on String Databases
Proceedings of the 2007 conference on Databases and Information Systems IV: Selected Papers from the Seventh International Baltic Conference DB&IS'2006
BAC Overlap Identification Based on Bit-Vectors
IWANN '09 Proceedings of the 10th International Work-Conference on Artificial Neural Networks: Part I: Bio-Inspired Systems: Computational and Ambient Intelligence
Sparse RNA Folding: Time and Space Efficient Algorithms
CPM '09 Proceedings of the 20th Annual Symposium on Combinatorial Pattern Matching
A space efficient algorithm for the constrained heaviest common subsequence problem
Proceedings of the 46th Annual Southeast Regional Conference on XX
A breadth-first approach to memory-efficient graph search
AAAI'06 proceedings of the 21st national conference on Artificial intelligence - Volume 2
Fast algorithms for computing tree LCS
Theoretical Computer Science
Alignment of Noisy and Uniformly Scaled Time Series
DEXA '09 Proceedings of the 20th International Conference on Database and Expert Systems Applications
An improved search algorithm for optimal multiple-sequence alignment
Journal of Artificial Intelligence Research
Divide-and-conquer bidirectional search: first results
IJCAI'99 Proceedings of the 16th international joint conference on Artificial intelligence - Volume 2
Learning value predictors for the speculative execution of information gathering plans
IJCAI'03 Proceedings of the 18th international joint conference on Artificial intelligence
Comparing best-first search and dynamic programming for optimal multiple sequence alignment
IJCAI'03 Proceedings of the 18th international joint conference on Artificial intelligence
IJCAI'03 Proceedings of the 18th international joint conference on Artificial intelligence
Breadth-first heuristic search
Artificial Intelligence
IEEE Transactions on Systems, Man, and Cybernetics, Part C: Applications and Reviews
On the Approximation of Optimal Structures for RNA-RNA Interaction
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
An adaptive multi-policy grid service for biological sequence comparison
Journal of Parallel and Distributed Computing
An adaptive grid implementation of DNA sequence alignment
Future Generation Computer Systems
An almost-linear time and linear space algorithm for the longest common subsequence problem
Information Processing Letters
Algorithms for memory hierarchies: advanced lectures
Algorithms for memory hierarchies: advanced lectures
CIAA'02 Proceedings of the 7th international conference on Implementation and application of automata
The longest common subsequence problem a finite automata approach
CIAA'03 Proceedings of the 8th international conference on Implementation and application of automata
SPIRE'07 Proceedings of the 14th international conference on String processing and information retrieval
SPIRE'07 Proceedings of the 14th international conference on String processing and information retrieval
Fast Hinge Detection Algorithms for Flexible Protein Structures
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Approximating border length for DNA microarray synthesis
TAMC'08 Proceedings of the 5th international conference on Theory and applications of models of computation
Journal of Discrete Algorithms
Measuring performance of web image context extraction
Proceedings of the Tenth International Workshop on Multimedia Data Mining
Solving longest common subsequence and related problems on graphical processing units
Software—Practice & Experience
Metrics for MT evaluation: evaluating reordering
Machine Translation
Cache-Oblivious Dynamic Programming for Bioinformatics
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
IEEE Transactions on Information Theory
Perturbation-based user-input-validation testing of web applications
Journal of Systems and Software
A parallel longest common subsequence algorithm in UPC
SpringSim '10 Proceedings of the 2010 Spring Simulation Multiconference
A fully compressed algorithm for computing the edit distance of run-length encoded strings
ESA'10 Proceedings of the 18th annual European conference on Algorithms: Part I
Measuring tree similarity for natural language processing based information retrieval
NLDB'10 Proceedings of the Natural language processing and information systems, and 15th international conference on Applications of natural language to information systems
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
SPIRE'10 Proceedings of the 17th international conference on String processing and information retrieval
Sparse RNA folding: Time and space efficient algorithms
Journal of Discrete Algorithms
Comparing Sanskrit texts for critical editions
COLING '10 Proceedings of the 23rd International Conference on Computational Linguistics: Posters
On the generalized constrained longest common subsequence problems
Journal of Combinatorial Optimization
An improved algorithm for the longest common subsequence problem
Computers and Operations Research
Packing alignment: alignment for sequences of various length events
PAKDD'11 Proceedings of the 15th Pacific-Asia conference on Advances in knowledge discovery and data mining - Volume Part II
Robust argumentative zoning for sensemaking in scholarly documents
NLP4DL'09/AT4DL'09 Proceedings of the 2009 international conference on Advanced language technologies for digital libraries
Approximate point set pattern matching with Lp-norm
SPIRE'11 Proceedings of the 18th international conference on String processing and information retrieval
Approximation algorithms for speeding up dynamic programming and denoising aCGH data
Journal of Experimental Algorithmics (JEA)
Faster algorithms for computing longest common increasing subsequences
Journal of Discrete Algorithms
Memory Efficient Algorithms for Structural Alignment of RNAs with Pseudoknots
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Fast scalable algorithm on LARPBS for sequence alignment
ISPA'05 Proceedings of the 2005 international conference on Parallel and Distributed Processing and Applications
Faster algorithms for computing longest common increasing subsequences
CPM'06 Proceedings of the 17th Annual conference on Combinatorial Pattern Matching
Efficient algorithms for regular expression constrained sequence alignment
CPM'06 Proceedings of the 17th Annual conference on Combinatorial Pattern Matching
A hybrid HMM/DPA adaptive gesture recognition method
ISVC'05 Proceedings of the First international conference on Advances in Visual Computing
Mechanisms of knowledge evolution for web information extraction
Proceedings of the 2005 international conference on Federation over the Web
Space efficient algorithms for ordered tree comparison
ISAAC'05 Proceedings of the 16th international conference on Algorithms and Computation
Approximate dynamic programming using halfspace queries and multiscale Monge decomposition
Proceedings of the twenty-second annual ACM-SIAM symposium on Discrete Algorithms
Practical linear space algorithms for computing string-edit distances
ICIC'06 Proceedings of the 2006 international conference on Computational Intelligence and Bioinformatics - Volume Part III
Parallel linear space algorithm for large-scale sequence alignment
Euro-Par'05 Proceedings of the 11th international Euro-Par conference on Parallel Processing
Load balancing for hierarchical grid computing: a case study
HiPC'04 Proceedings of the 11th international conference on High Performance Computing
A hyper-heuristic for the Longest Common Subsequence problem
Computational Biology and Chemistry
Large-Scale directed model checking LTL
SPIN'06 Proceedings of the 13th international conference on Model Checking Software
Fast and cache-oblivious dynamic programming with local dependencies
LATA'12 Proceedings of the 6th international conference on Language and Automata Theory and Applications
Recent developments in the theory of data structures
Computer Languages
A bibliography on computational molecular biology and genetics
Mathematical and Computer Modelling: An International Journal
Survey: An overview on XML similarity: Background, current trends and future directions
Computer Science Review
GPU accelerated computation of the longest common subsequence
Facing the Multicore-Challenge II
Recognising sentence similarity using similitude and dissimilarity features
International Journal of Advanced Intelligence Paradigms
Proceedings of the ATIP/A*CRC Workshop on Accelerator Technologies for High-Performance Computing: Does Asia Lead the Way?
Towards efficient similar sentences extraction
IDEAL'12 Proceedings of the 13th international conference on Intelligent Data Engineering and Automated Learning
Speeding-up Hirschberg and Hunt-Szymanski LCS Algorithms
Fundamenta Informaticae - Computing Patterns in Strings
Parallel syntenic alignment on GPUs
Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine
Parallel longest common subsequence using graphics hardware
EG PGV'08 Proceedings of the 8th Eurographics conference on Parallel Graphics and Visualization
Direct approaches to exploit many-core architecture in bioinformatics
Future Generation Computer Systems
Haplotype inference via hierarchical genotype parsing
WABI'07 Proceedings of the 7th international conference on Algorithms in Bioinformatics
Finding many optimal paths without growing any optimal path trees
COCOON'07 Proceedings of the 13th annual international conference on Computing and Combinatorics
A linear algorithm for 3-letter longest common weakly increasing subsequence
Information Processing Letters
WS-Finder: a framework for similarity search of web services
ICSOC'12 Proceedings of the 10th international conference on Service-Oriented Computing
Resource requirement prediction using clone detection technique
Future Generation Computer Systems
A regularity lemma and twins in words
Journal of Combinatorial Theory Series A
Mining Publication Records on Personal Publication Web Pages Based on Conditional Random Fields
WI-IAT '12 Proceedings of the The 2012 IEEE/WIC/ACM International Joint Conferences on Web Intelligence and Intelligent Agent Technology - Volume 01
Visualization of genetic lineages and inheritance information in genetic programming
Proceedings of the 15th annual conference companion on Genetic and evolutionary computation
Information Sciences: an International Journal
Model-driven matching and segmentation of trajectories
Proceedings of the 21st ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems
Two-Sided boundary labeling with adjacent sides
WADS'13 Proceedings of the 13th international conference on Algorithms and Data Structures
Alignment-Based metrics for trace comparison
Euro-Par'13 Proceedings of the 19th international conference on Parallel Processing
Road segment selection with strokes and stability
Proceedings of the 1st ACM SIGSPATIAL International Workshop on MapInteraction
Parallelizing dynamic programming through rank convergence
Proceedings of the 19th ACM SIGPLAN symposium on Principles and practice of parallel programming
An efficient code update solution for wireless sensor network reprogramming
Proceedings of the Eleventh ACM International Conference on Embedded Software
Fast Longest Common Subsequence with General Integer Scoring Support on GPUs
Proceedings of Programming Models and Applications on Multicores and Manycores
One-dimensional approximate point set pattern matching with Lp-norm
Theoretical Computer Science
Complexity Aware Encoding of the Motion Compensation Process of the H.264/AVC Video Coding Standard
Proceedings of Network and Operating System Support on Digital Audio and Video Workshop
| Hi-index | 48.32 |
The problem of finding a longest common subsequence of two strings has been solved in quadratic time and space. An algorithm is presented which will solve this problem in quadratic time and in linear space.