Gene finding using evolvable reasoning hardware

Authors:
Moritoshi Yasunaga;Ikuo Yoshihara;Jung H. Kim
Affiliations:
Institute of Information Sciences and Electronics, University of Tsukuba, Tsukuba, Ibaraki, Japan;Faculty of Engineering, Miyazaki University, Miyazaki, Japan;System Engineering Dept., University of Arkansas at Little Rock, Little Rock, Arkansas
Venue:
ICES'03 Proceedings of the 5th international conference on Evolvable systems: from biology to hardware
Year:
2003

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Abstract

We have proposed and developed an evolvable reasoning hardware (ERHW) already. In this paper, we apply the ERHW to the gene finding task that is one of the most important tasks in the genome informatics. We evaluate the ERHW using human and other living organisms' DNAs. The ERHW shows high reasoning accuracy of 95.8% and high reasoning speed of 280ns.