Diffeomorphisms Groups and Pattern Matching in Image Analysis
International Journal of Computer Vision
Journal of Mathematical Imaging and Vision
Group Actions, Homeomorphisms, and Matching: A General Framework
International Journal of Computer Vision - Special issue on statistical and computational theories of vision: Part II
Multimodal Elastic Matching of Brain Images
ECCV '00 Proceedings of the 6th European Conference on Computer Vision-Part II
A Versatile Support for Binding Native Code to Java
HPCN Europe 2000 Proceedings of the 8th International Conference on High-Performance Computing and Networking
Hierarchical Matching of Cortical Features for Deformable Brain Image Registration
IPMI '99 Proceedings of the 16th International Conference on Information Processing in Medical Imaging
Incorporating an Image Distortion Model in Non-rigid Alignment of EPI with Conventional MRI
IPMI '99 Proceedings of the 16th International Conference on Information Processing in Medical Imaging
IPMI '01 Proceedings of the 17th International Conference on Information Processing in Medical Imaging
IPMI '01 Proceedings of the 17th International Conference on Information Processing in Medical Imaging
ANIMAL+INSECT: Improved Cortical Structure Segmentation
IPMI '99 Proceedings of the 16th International Conference on Information Processing in Medical Imaging
MICCAI '01 Proceedings of the 4th International Conference on Medical Image Computing and Computer-Assisted Intervention
Mass Preserving Mappings and Image Registration
MICCAI '01 Proceedings of the 4th International Conference on Medical Image Computing and Computer-Assisted Intervention
MICCAI '02 Proceedings of the 5th International Conference on Medical Image Computing and Computer-Assisted Intervention-Part I
Performance Issues in Shape Classification
MICCAI '02 Proceedings of the 5th International Conference on Medical Image Computing and Computer-Assisted Intervention-Part I
A Viscous Fluid Model for Multimodal Non-rigid Image Registration Using Mutual Information
MICCAI '02 Proceedings of the 5th International Conference on Medical Image Computing and Computer-Assisted Intervention-Part II
Quantifying Small Changes in Brain Ventricular Volume Using Non-rigid Registration
MICCAI '01 Proceedings of the 4th International Conference on Medical Image Computing and Computer-Assisted Intervention
Deformable Contour Based Algorithm for Segmentation of the Hippocampus from MRI
CAIP '01 Proceedings of the 9th International Conference on Computer Analysis of Images and Patterns
Automatic Construction of 3D Statistical Deformation Models Using Non-rigid Registration
MICCAI '01 Proceedings of the 4th International Conference on Medical Image Computing and Computer-Assisted Intervention
A Coupled PDE Model of Nonlinear Diffusion for Image Smoothing and Segmentation
CVPR '98 Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
Anomaly Detection through Registration
CVPR '98 Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
Synthesis of an Individualized Cranial Atlas with Dysmorphic Shape
MMBIA '96 Proceedings of the 1996 Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA '96)
A new image registration technique with free boundary constraints: application to mammography
Computer Vision and Image Understanding - Special issue on nonrigid image registration
3D brain surface matching based on geodesics and local geometry
Computer Vision and Image Understanding - Special issue on nonrigid image registration
Iconic feature based nonrigid registration: the PASHA algorithm
Computer Vision and Image Understanding - Special issue on nonrigid image registration
Landmark Matching via Large Deformation Diffeomorphisms on the Sphere
Journal of Mathematical Imaging and Vision
Nonrigid registration of medical image by linear singular blending techniques
Pattern Recognition Letters
Optimal Mass Transport for Registration and Warping
International Journal of Computer Vision
A template free approach to volumetric spatial normalization of brain anatomy
Pattern Recognition Letters
Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms
International Journal of Computer Vision
Fingerprint Warping Using Ridge Curve Correspondences
IEEE Transactions on Pattern Analysis and Machine Intelligence
Geodesic Shooting for Computational Anatomy
Journal of Mathematical Imaging and Vision
A computing model of pressure distribution from tight underwear
Journal of Computational and Applied Mathematics - Special issue: The international symposium on computing and information (ISCI2004)
Geodesic Matching with Free Extremities
Journal of Mathematical Imaging and Vision
Image registration by local histogram matching
Pattern Recognition
Non-Rigid Multi-Modal Image Registration Using Cross-Cumulative Residual Entropy
International Journal of Computer Vision
Knowledge-based localization of hippocampus in human brain MRI
Computers in Biology and Medicine
An image processing approach to surface matching
SGP '05 Proceedings of the third Eurographics symposium on Geometry processing
Multiscale Joint Segmentation and Registration of Image Morphology
IEEE Transactions on Pattern Analysis and Machine Intelligence
Journal of Mathematical Imaging and Vision
Possibilistic clustering criterion for the segmentation of magnetic resonance images
ISCGAV'04 Proceedings of the 4th WSEAS International Conference on Signal Processing, Computational Geometry & Artificial Vision
Transport of Relational Structures in Groups of Diffeomorphisms
Journal of Mathematical Imaging and Vision
Differential Evolution as a viable tool for satellite image registration
Applied Soft Computing
Harmonic Surface Mapping with Laplace-Beltrami Eigenmaps
MICCAI '08 Proceedings of the 11th International Conference on Medical Image Computing and Computer-Assisted Intervention, Part II
Assessment of Reliability of Multi-site Neuroimaging Via Traveling Phantom Study
MICCAI '08 Proceedings of the 11th International Conference on Medical Image Computing and Computer-Assisted Intervention, Part II
MR Navigated Breast Surgery: Method and Initial Clinical Experience
MICCAI '08 Proceedings of the 11th International Conference on Medical Image Computing and Computer-Assisted Intervention, Part II
Physically-Based Validation of Deformable Medical Image Registration
MICCAI '08 Proceedings of the 11th International Conference on Medical Image Computing and Computer-Assisted Intervention, Part II
MICCAI '08 Proceedings of the 11th International Conference on Medical Image Computing and Computer-Assisted Intervention, Part II
Proceedings of the 3rd International Conference on Ubiquitous Information Management and Communication
A Combined Segmentation and Registration Framework with a Nonlinear Elasticity Smoother
SSVM '09 Proceedings of the Second International Conference on Scale Space and Variational Methods in Computer Vision
Inverse-Consistent Surface Mapping with Laplace-Beltrami Eigen-Features
IPMI '09 Proceedings of the 21st International Conference on Information Processing in Medical Imaging
International Journal of Computer Vision
MICCAI '09 Proceedings of the 12th International Conference on Medical Image Computing and Computer-Assisted Intervention: Part II
On the Manifold Structure of the Space of Brain Images
MICCAI '09 Proceedings of the 12th International Conference on Medical Image Computing and Computer-Assisted Intervention: Part I
The multivariate A/C/E model and the genetics of fiber architecture
ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
Instance-based generative biological shape modeling
ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
Demons algorithms for fluid and curvature registration
ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
Image registration using uncertainty coefficients
ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
A Lagrangian formulation for statistical fluid registration
ISBI'09 Proceedings of the Sixth IEEE international conference on Symposium on Biomedical Imaging: From Nano to Macro
An Optimal Control Formulation of an Image Registration Problem
Journal of Mathematical Imaging and Vision
A deformable model for fingerprint matching
Pattern Recognition
Registration and retrieval of highly elastic bodies using contextual information
Pattern Recognition Letters
A method for the transport and registration of images on implicit surfaces
SSVM'07 Proceedings of the 1st international conference on Scale space and variational methods in computer vision
Brain image registration using cortically constrained harmonic mappings
IPMI'07 Proceedings of the 20th international conference on Information processing in medical imaging
A marginalized MAP approach and EM optimization for pair-wise registration
IPMI'07 Proceedings of the 20th international conference on Information processing in medical imaging
Non-parametric surface-based regularisation for building statistical shape models
IPMI'07 Proceedings of the 20th international conference on Information processing in medical imaging
A duality based algorithm for TV-L¹-optical-flow image registration
MICCAI'07 Proceedings of the 10th international conference on Medical image computing and computer-assisted intervention
Mean template for tensor-based morphometry using deformation tensors
MICCAI'07 Proceedings of the 10th international conference on Medical image computing and computer-assisted intervention
Statistically assisted fluid image registration algorithm -SAFIRA
ISBI'10 Proceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro
Accounting for changing overlap in variational image registration
ISBI'10 Proceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro
Non-rigid coregistration of diffusion kurtosis data
ISBI'10 Proceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro
Computer Methods and Programs in Biomedicine
Nonlinear elastic spline registration: evaluation with longitudinal Huntington's disease data
WBIR'10 Proceedings of the 4th international conference on Biomedical image registration
Nonlinear elasticity registration and sobolev gradients
WBIR'10 Proceedings of the 4th international conference on Biomedical image registration
Generalization of deformable registration in riemannian sobolev spaces
MICCAI'10 Proceedings of the 13th international conference on Medical image computing and computer-assisted intervention: Part II
Diffeomorphic registration of images with variable contrast enhancement
Journal of Biomedical Imaging - Special issue on modern mathematics in biomedical imaging
SIAM Journal on Imaging Sciences
Automated surface matching using mutual information applied to riemann surface structures
MICCAI'05 Proceedings of the 8th international conference on Medical image computing and computer-assisted intervention - Volume Part II
Topology-preserving registration: a solution via graph cuts
IWCIA'11 Proceedings of the 14th international conference on Combinatorial image analysis
An entropy-based technique for nonrigid medical image alignment
IWCIA'11 Proceedings of the 14th international conference on Combinatorial image analysis
IPMI'11 Proceedings of the 22nd international conference on Information processing in medical imaging
The complex wave representation of distance transforms
EMMCVPR'11 Proceedings of the 8th international conference on Energy minimization methods in computer vision and pattern recognition
Registration for 3D morphological comparison of brain aneurysm growth
ISVC'11 Proceedings of the 7th international conference on Advances in visual computing - Volume Part I
Learning statistical correlation of prostate deformations for fast registration
MLMI'11 Proceedings of the Second international conference on Machine learning in medical imaging
A review of atlas-based segmentation for magnetic resonance brain images
Computer Methods and Programs in Biomedicine
A combined segmentation and registration framework with a nonlinear elasticity smoother
Computer Vision and Image Understanding
Patient specific dosimetry phantoms using multichannel LDDMM of the whole body
Journal of Biomedical Imaging - Special issue on Parallel Computation in Medical Imaging Applications
Efficient probabilistic and geometric anatomical mapping using particle mesh approximation on GPUs
Journal of Biomedical Imaging - Special issue on Parallel Computation in Medical Imaging Applications
MICCAI'06 Proceedings of the 9th international conference on Medical Image Computing and Computer-Assisted Intervention - Volume Part I
Transformation model and constraints cause bias in statistics on deformation fields
MICCAI'06 Proceedings of the 9th international conference on Medical Image Computing and Computer-Assisted Intervention - Volume Part I
Personalized computational models in human anatomy for electromagnetic dosimetry
Proceedings of the 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies
A physically-motivated deformable model based on fluid dynamics
ECCV'06 Proceedings of the 9th European conference on Computer Vision - Volume Part I
Automatic segmentation of intra-treatment CT images for adaptive radiation therapy of the prostate
MICCAI'05 Proceedings of the 8th international conference on Medical Image Computing and Computer-Assisted Intervention - Volume Part I
Diffeomorphic registration using b-splines
MICCAI'06 Proceedings of the 9th international conference on Medical Image Computing and Computer-Assisted Intervention - Volume Part II
A framework for image-guided breast surgery
Miar'06 Proceedings of the Third international conference on Medical Imaging and Augmented Reality
Image deformation using velocity fields: an exact solution
ICIAR'05 Proceedings of the Second international conference on Image Analysis and Recognition
Journal of Scientific Computing
Analyzing anatomical structures: leveraging multiple sources of knowledge
CVBIA'05 Proceedings of the First international conference on Computer Vision for Biomedical Image Applications
Kernel bundle EPDiff: evolution equations for multi-scale diffeomorphic image registration
SSVM'11 Proceedings of the Third international conference on Scale Space and Variational Methods in Computer Vision
CUDA optimization strategies for compute- and memory-bound neuroimaging algorithms
Computer Methods and Programs in Biomedicine
Structural shape characterization via exploratory factor analysis
Artificial Intelligence in Medicine
A unified image registration framework for ITK
WBIR'12 Proceedings of the 5th international conference on Biomedical Image Registration
Gradient field approximation: Application to registration in image processing
Journal of Computational and Applied Mathematics
Hyperbolic ricci flow and its application in studying lateral ventricle morphometry
MBIA'12 Proceedings of the Second international conference on Multimodal Brain Image Analysis
Improving intensity-based lung CT registration accuracy utilizing vascular information
Journal of Biomedical Imaging - Special issue on Lung Imaging Data Analysis
Sparse Multi-Scale Diffeomorphic Registration: The Kernel Bundle Framework
Journal of Mathematical Imaging and Vision
Robust diffeomorphic mapping via geodesically controlled active shapes
Journal of Biomedical Imaging
Journal of Biomedical Imaging
Multi-layer deformation estimation for fluoroscopic imaging
IPMI'13 Proceedings of the 23rd international conference on Information Processing in Medical Imaging
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A general automatic approach is presented for accommodating local shape variation when mapping a two-dimensional (2-D) or three-dimensional (3-D) template image into alignment with a topologically similar target image. Local shape variability is accommodated by applying a vector-field transformation to the underlying material coordinate system of the template while constraining the transformation to be smooth (globally positive definite Jacobian). Smoothness is guaranteed without specifically penalizing large-magnitude deformations of small subvolumes by constraining the transformation on the basis of a Stokesian limit of the fluid-dynamical Navier-Stokes equations. This differs fundamentally from quadratic penalty methods, such as those based on linearized elasticity or thin-plate splines, in that stress restraining the motion relaxes over time allowing large-magnitude deformations. Kinematic nonlinearities are inherently necessary to maintain continuity of structures during large-magnitude deformations, and are included in all results. After initial global registration, final mappings are obtained by numerically solving a set of nonlinear partial differential equations associated with the constrained optimization problem. Automatic regridding is performed by propagating templates as the nonlinear transformations evaluated on a finite lattice become singular. Application of the method to intersubject registration of neuroanatomical structures illustrates the ability to account for local anatomical variability