Combinatorial optimization problems in self-assembly
STOC '02 Proceedings of the thiry-fourth annual ACM symposium on Theory of computing
A route to fractal DNA-assembly
Natural Computing: an international journal
Nonconventional Computing Paradigms in the New Millenium: A Roundtable
Computing in Science and Engineering
Strand design for biomolecular computation
Theoretical Computer Science - Natural computing
Complexity analysis of the SAT engine: DNA algorithms as probabilistic algorithms
Theoretical Computer Science - Natural computing
The emerging discipline of biomolecular computation in the US
New Generation Computing
Take Advantage of the Computing Power of DNA Computers
IPDPS '00 Proceedings of the 15 IPDPS 2000 Workshops on Parallel and Distributed Processing
A Magic Pot: Self-assembly Computation Revisited
Formal and Natural Computing - Essays Dedicated to Grzegorz Rozenberg [on occasion of his 60th birthday, March 14, 2002]
DNA Implementation of Theorem Proving with Resolution Refutation in Propositional Logic
DNA8 Revised Papers from the 8th International Workshop on DNA Based Computers: DNA Computing
A magic pot: self-assembly computation revisited
Formal and natural computing
Complexities for generalized models of self-assembly
SODA '04 Proceedings of the fifteenth annual ACM-SIAM symposium on Discrete algorithms
Invadable self-assembly: combining robustness with efficiency
SODA '04 Proceedings of the fifteenth annual ACM-SIAM symposium on Discrete algorithms
Immersive Design of DNA Molecules with a Tangible Interface
VIS '04 Proceedings of the conference on Visualization '04
Self assembly times in DNA-based computation
ACM SIGMETRICS Performance Evaluation Review
Genetic Programming and Evolvable Machines
ICCAD '05 Proceedings of the 2005 IEEE/ACM International conference on Computer-aided design
Multiset-Based Self-Assembly of Graphs
Fundamenta Informaticae - New Frontiers in Scientific Discovery - Commemorating the Life and Work of Zdzislaw Pawlak
Self-assembly of strings and languages
Theoretical Computer Science
Arithmetic computation in the tile assembly model: Addition and multiplication
Theoretical Computer Science
An Architectural Style for Solving Computationally Intensive Problems on Large Networks
SEAMS '07 Proceedings of the 2007 International Workshop on Software Engineering for Adaptive and Self-Managing Systems
Electronic Notes in Theoretical Computer Science (ENTCS)
Fault and adversary tolerance as an emergent property of distributed systems' software architectures
Proceedings of the 2007 workshop on Engineering fault tolerant systems
Dimension augmentation and combinatorial criteria for efficient error-resistant DNA self-assembly
Proceedings of the nineteenth annual ACM-SIAM symposium on Discrete algorithms
Nondeterministic polynomial time factoring in the tile assembly model
Theoretical Computer Science
Solving NP-complete problems in the tile assembly model
Theoretical Computer Science
Monomer Control for Error Tolerance in DNA Self-Assembly
Journal of Electronic Testing: Theory and Applications
Combining self-healing and proofreading in self-assembly
Natural Computing: an international journal
Toward minimum size self-assembled counters
Natural Computing: an international journal
Staged self-assembly: nanomanufacture of arbitrary shapes with O(1) glues
Natural Computing: an international journal
Strict Self-assembly of Discrete Sierpinski Triangles
CiE '07 Proceedings of the 3rd conference on Computability in Europe: Computation and Logic in the Real World
Computability and Complexity in Self-assembly
CiE '08 Proceedings of the 4th conference on Computability in Europe: Logic and Theory of Algorithms
Transformations and Preservation of Self-assembly Dynamics through Homotheties
Language and Automata Theory and Applications
A Framework for Designing Novel Magnetic Tiles Capable of Complex Self-assemblies
UC '08 Proceedings of the 7th international conference on Unconventional Computing
Self-assembly of Decidable Sets
UC '08 Proceedings of the 7th international conference on Unconventional Computing
A Limit to the Power of Multiple Nucleation in Self-assembly
DISC '08 Proceedings of the 22nd international symposium on Distributed Computing
Solving satisfiability in the tile assembly model with a constant-size tileset
Journal of Algorithms
Strict self-assembly of discrete Sierpinski triangles
Theoretical Computer Science
Path finding in the tile assembly model
Theoretical Computer Science
Pictures worth a thousand tiles, a geometrical programming language for self-assembly
Theoretical Computer Science
The 4-way deterministic tiling problem is undecidable
Theoretical Computer Science
Crystal-growth-inspired algorithms for computational grids
BADS '09 Proceedings of the 2009 workshop on Bio-inspired algorithms for distributed systems
Application of DNA Computing by Self-assembly on 0-1 Knapsack Problem
ISNN 2009 Proceedings of the 6th International Symposium on Neural Networks: Advances in Neural Networks - Part III
Brief announcement: self-assembly as graph grammar as distributed system
Proceedings of the 28th ACM symposium on Principles of distributed computing
Random Number Selection in Self-assembly
UC '09 Proceedings of the 8th International Conference on Unconventional Computation
Polyomino-safe DNA self-assembly via block replacement
Natural Computing: an international journal
Self-assembly of discrete self-similar fractals
Natural Computing: an international journal
Describing self-assembly of nanostructures
SOFSEM'08 Proceedings of the 34th conference on Current trends in theory and practice of computer science
Staged self-assembly: nanomanufacture of arbitrary shapes with O(1) glues
DNA13'07 Proceedings of the 13th international conference on DNA computing
Activatable tiles: compact, robust programmable assembly and other applications
DNA13'07 Proceedings of the 13th international conference on DNA computing
Constant-size tileset for solving an NP-complete problem in nondeterministic linear time
DNA13'07 Proceedings of the 13th international conference on DNA computing
Toward minimum size self-assembled counters
DNA13'07 Proceedings of the 13th international conference on DNA computing
Stepwise assembly of DNA tile on surfaces
DNA13'07 Proceedings of the 13th international conference on DNA computing
Controlling errors in the process of molecular self-assembly
Allerton'09 Proceedings of the 47th annual Allerton conference on Communication, control, and computing
Approximate self-assembly of the Sierpinski triangle
CiE'10 Proceedings of the Programs, proofs, process and 6th international conference on Computability in Europe
Self-assembly of infinite structures: A survey
Theoretical Computer Science
Limitations of self-assembly at temperature 1
Theoretical Computer Science
Improving efficiency of 3-SAT-solving tile systems
DNA'10 Proceedings of the 16th international conference on DNA computing and molecular programming
Optimizing tile concentrations to minimize errors and time for DNA tile self-assembly systems
DNA'10 Proceedings of the 16th international conference on DNA computing and molecular programming
Negative interactions in irreversible self-assembly
DNA'10 Proceedings of the 16th international conference on DNA computing and molecular programming
Synthesizing minimal tile sets for patterned DNA self-assembly
DNA'10 Proceedings of the 16th international conference on DNA computing and molecular programming
Randomized self assembly of rectangular nano structures
DNA'10 Proceedings of the 16th international conference on DNA computing and molecular programming
Towards a neighborhood simplification of tile systems: From Moore to quasi-linear dependencies
Natural Computing: an international journal
The effect of malformed tiles on tile assemblies within the kinetic tile assembly model
Natural Computing: an international journal
On aggregation in multiset-based self-assembly of graphs
Natural Computing: an international journal
Optimization of supply diversity for the self-assembly of simple objects in two and three dimensions
Natural Computing: an international journal
Distributed agreement in tile self-assembly
Natural Computing: an international journal
Self-assembly of decidable sets
Natural Computing: an international journal
Snakes and cellular automata: reductions and inseparability results
CSR'11 Proceedings of the 6th international conference on Computer science: theory and applications
Plane-filling properties of directed figures
FAW-AAIM'11 Proceedings of the 5th joint international frontiers in algorithmics, and 7th international conference on Algorithmic aspects in information and management
Self-assembling rulers for approximating generalized sierpinski carpets
COCOON'11 Proceedings of the 17th annual international conference on Computing and combinatorics
On stoichiometry for the assembly of flexible tile DNA complexes
Natural Computing: an international journal
Polyominoes simulating arbitrary-neighborhood zippers and tilings
Theoretical Computer Science
Less haste, less waste: on recycling and its limits in strand displacement systems
DNA'11 Proceedings of the 17th international conference on DNA computing and molecular programming
One-dimensional staged self-assembly
DNA'11 Proceedings of the 17th international conference on DNA computing and molecular programming
Exact shapes and turing universality at temperature 1 with a single negative glue
DNA'11 Proceedings of the 17th international conference on DNA computing and molecular programming
Randomized Self-Assembly for Exact Shapes
SIAM Journal on Computing
Self-assemblying classes of shapes with a minimum number of tiles, and in optimal time
FSTTCS'06 Proceedings of the 26th international conference on Foundations of Software Technology and Theoretical Computer Science
Self-correcting self-assembly: growth models and the hammersley process
DNA'05 Proceedings of the 11th international conference on DNA Computing
Complexity of compact proofreading for self-assembled patterns
DNA'05 Proceedings of the 11th international conference on DNA Computing
A microfluidic device for DNA tile self-assembly
DNA'05 Proceedings of the 11th international conference on DNA Computing
Parallelism and time in hierarchical self-assembly
Proceedings of the twenty-third annual ACM-SIAM symposium on Discrete Algorithms
On self-assembly in population p systems
UC'05 Proceedings of the 4th international conference on Unconventional Computation
On times to compute shapes in 2d tile self-assembly
DNA'06 Proceedings of the 12th international conference on DNA Computing
Temperature 1 self-assembly: deterministic assembly in 3D and probabilistic assembly in 2D
Proceedings of the twenty-second annual ACM-SIAM symposium on Discrete Algorithms
The power of nondeterminism in self-assembly
Proceedings of the twenty-second annual ACM-SIAM symposium on Discrete Algorithms
Design, simulation, and experimental demonstration of self-assembled DNA nanostructures and motors
UPP'04 Proceedings of the 2004 international conference on Unconventional Programming Paradigms
DNA'04 Proceedings of the 10th international conference on DNA computing
Error free self-assembly using error prone tiles
DNA'04 Proceedings of the 10th international conference on DNA computing
Complexity of self-assembled shapes
DNA'04 Proceedings of the 10th international conference on DNA computing
Program size and temperature in self-assembly
ISAAC'11 Proceedings of the 22nd international conference on Algorithms and Computation
Engineering and verifying requirements for programmable self-assembling nanomachines
Proceedings of the 34th International Conference on Software Engineering
Natural Computing: an international journal
Natural Computing: an international journal
Efficient 3-SAT algorithms in the tile assembly model
Natural Computing: an international journal
Self-assembly with geometric tiles
ICALP'12 Proceedings of the 39th international colloquium conference on Automata, Languages, and Programming - Volume Part I
Multiset-Based Self-Assembly of Graphs
Fundamenta Informaticae - New Frontiers in Scientific Discovery - Commemorating the Life and Work of Zdzislaw Pawlak
On the behavior of tile assembly system at high temperatures
CiE'12 Proceedings of the 8th Turing Centenary conference on Computability in Europe: how the world computes
Theory of algorithmic self-assembly
Communications of the ACM
Programming and evolving physical self-assembling systems in three dimensions
Natural Computing: an international journal
Theory and applications of DNA codeword design
TPNC'12 Proceedings of the First international conference on Theory and Practice of Natural Computing
An introduction to tile-based self-assembly
UCNC'12 Proceedings of the 11th international conference on Unconventional Computation and Natural Computation
Abstraction of graph-based models of bio-molecular reaction systems for efficient simulation
CMSB'12 Proceedings of the 10th international conference on Computational Methods in Systems Biology
Deterministic polynomial-time algorithms for designing short DNA words
Theoretical Computer Science
One-dimensional staged self-assembly
Natural Computing: an international journal
Turing patterns with Turing machines: emergence and low-level structure formation
Natural Computing: an international journal
Logically and physically reversible natural computing: a tutorial
RC'13 Proceedings of the 5th international conference on Reversible Computation
The two-handed tile assembly model is not intrinsically universal
ICALP'13 Proceedings of the 40th international conference on Automata, Languages, and Programming - Volume Part I
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